Entry information : CtaiTPx01_LMG19424
Entry ID 12492
Creation 2013-08-13 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-09-11 (Christophe Dunand)
Peroxidase information: CtaiTPx01_LMG19424
Name CtaiTPx01_LMG19424
Class Thioredoxin-dependent thiol peroxidase    [Orthogroup: TPx001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Cupriavidus
Organism Cupriavidus taiwanensis    [TaxId: 164546 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CtaiTPx01_LMG19424
start..stop
S start..stop
RsoTPx01_GMI1000 261 8e-91 35..200 1..166
DarTPx_RCB 235 2e-80 37..199 4..166
BmTPx01 233 2e-79 35..200 1..167
BviTPx01 229 7e-78 35..200 1..167
Literature and cross-references CtaiTPx01_LMG19424
Protein ref. UniProtKB:   B3R6K5
DNA ref. GenBank:   NC_010528.1 (2805805..2806407)
Protein sequence: CtaiTPx01_LMG19424
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   200
PWM (Da):   %s   20663.66  
PI (pH):   %s   5.27
Sequence
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Send to Peroxiscan
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MNSWPAAGPN PSLAAGLAPA PDCNRKLIRY QGVDMSNVTL GGNAIEVAGK FPQAGDKAPA FSLVGKDLKD VSLADFAGKR KVLNIVPSLD TPVCQASARK FNEAASGLAN TVVLTISADL 
PFAMGRFCTA EGLANVVPLS TMRGAEFKGN YGVDIKTGPL AGVTARAVVV LDENDTVKYS QLVPEIKNEP DYDAALAALK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1). C instead of A for the ATG!!!. Longer PS than other strains.
DNA
Send to BLAST
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ATGAATTCCT GGCCCGCCGC CGGACCGAAT CCGAGTCTTG CGGCAGGCCT TGCCCCCGCT CCGGACTGCA ACCGGAAACT CATCAGATAT CAAGGAGTAG ACATGAGCAA CGTCACCCTC  GGCGGCAACG CCATCGAAGT CGCAGGCAAG TTCCCGCAAG CCGGCGACAA GGCCCCCGCC TTCTCGCTGG TCGGCAAGGA CCTGAAGGAT GTCTCGCTGG CCGACTTCGC CGGCAAGCGC  AAGGTGCTGA ACATCGTCCC GAGCCTGGAT ACGCCGGTGT GCCAGGCGTC CGCGCGCAAG TTCAACGAAG CCGCCAGCGG CCTGGCCAAC ACCGTGGTGC TGACCATCTC CGCCGACCTG  CCGTTTGCCA TGGGGCGCTT CTGCACCGCC GAAGGCCTGG CCAACGTGGT GCCGCTGTCG ACCATGCGTG GTGCCGAGTT CAAGGGCAAC TATGGCGTCG ACATCAAGAC CGGCCCGCTC  GCCGGCGTGA CCGCCCGCGC CGTGGTGGTG CTGGACGAGA ACGACACCGT CAAGTACAGC CAGCTGGTGC CCGAGATCAA GAACGAGCCC GACTACGACG CCGCCCTGGC CGCGCTGAAG 
TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAATTCCT GGCCCGCCGC CGGACCGAAT CCGAGTCTTG CGGCAGGCCT TGCCCCCGCT CCGGACTGCA ACCGGAAACT CATCAGATAT CAAGGAGTAG ACATGAGCAA CGTCACCCTC  GGCGGCAACG CCATCGAAGT CGCAGGCAAG TTCCCGCAAG CCGGCGACAA GGCCCCCGCC TTCTCGCTGG TCGGCAAGGA CCTGAAGGAT GTCTCGCTGG CCGACTTCGC CGGCAAGCGC  AAGGTGCTGA ACATCGTCCC GAGCCTGGAT ACGCCGGTGT GCCAGGCGTC CGCGCGCAAG TTCAACGAAG CCGCCAGCGG CCTGGCCAAC ACCGTGGTGC TGACCATCTC CGCCGACCTG  CCGTTTGCCA TGGGGCGCTT CTGCACCGCC GAAGGCCTGG CCAACGTGGT GCCGCTGTCG ACCATGCGTG GTGCCGAGTT CAAGGGCAAC TATGGCGTCG ACATCAAGAC CGGCCCGCTC  GCCGGCGTGA CCGCCCGCGC CGTGGTGGTG CTGGACGAGA ACGACACCGT CAAGTACAGC CAGCTGGTGC CCGAGATCAA GAACGAGCCC GACTACGACG CCGCCCTGGC CGCGCTGAAG 
TAA 

Retrieve as FASTA