Entry information : CtaiCMDn01_LMG19424
Entry ID 12497
Creation 2013-08-13 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: CtaiCMDn01_LMG19424
Name CtaiCMDn01_LMG19424
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: CMDn001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Cupriavidus
Organism Cupriavidus taiwanensis    [TaxId: 164546 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CtaiCMDn01_LMG19424
start..stop
S start..stop
BbCMDn 52 0.000000003 1..168 1..168
CgCMDn 50 0.00000003 42..170 44..187
RleCMD 44 0.000005 60..151 30..125
SmeCMD 43 0.000005 52..151 21..125
Literature and cross-references CtaiCMDn01_LMG19424
Protein ref. UniProtKB:   B3RAQ8
DNA ref. GenBank:   NC_010530.1 (1492500..1491952)
Protein sequence: CtaiCMDn01_LMG19424
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   182
PWM (Da):   %s   20348.69  
PI (pH):   %s   5.79
Sequence
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Send to Peroxiscan
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MARIHDIDPD ALQGEARTTF ERVEREYGAF GNMLRVLGHR PPAVAHLFGL LLDSARDALI TRRHLEIVLV TASRLNACHY CISHHVPRLE ALGVTPETVE RILEPDVPGL DAVERLVRDY 
TVQVTTQRVT DTVVARLREH FTEAQVVELT LRAALCAFFA RFNEALEIQV EPELLAAEIH AT 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2). T instead of A for the ATG.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCACGCA TTCACGACAT CGATCCCGAC GCCCTGCAGG GCGAGGCCCG CACCACGTTC GAACGCGTGG AGCGCGAGTA CGGCGCGTTC GGCAACATGC TGCGCGTGCT CGGTCACCGG  CCGCCCGCGG TAGCGCACCT GTTCGGCCTG CTGCTGGATT CCGCTCGCGA CGCACTGATT ACGCGCCGGC ATCTGGAGAT CGTGCTGGTC ACGGCATCGC GGCTGAATGC GTGCCACTAC  TGCATCAGCC ATCACGTGCC AAGGCTGGAA GCGCTGGGCG TGACGCCCGA AACGGTAGAG CGGATCCTGG AGCCCGACGT GCCCGGGCTG GACGCCGTGG AGCGCCTGGT GCGCGACTAC  ACCGTGCAAG TCACGACGCA ACGCGTCACC GACACGGTGG TAGCGCGGCT GCGCGAGCAC TTCACCGAAG CGCAGGTCGT GGAGCTGACA CTGCGCGCGG CGCTGTGCGC ATTCTTCGCG 
CGCTTCAATG AAGCGCTGGA GATCCAGGTC GAGCCCGAAC TGCTGGCCGC CGAAATCCAC GCCACCTGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCACGCA TTCACGACAT CGATCCCGAC GCCCTGCAGG GCGAGGCCCG CACCACGTTC GAACGCGTGG AGCGCGAGTA CGGCGCGTTC GGCAACATGC TGCGCGTGCT CGGTCACCGG  CCGCCCGCGG TAGCGCACCT GTTCGGCCTG CTGCTGGATT CCGCTCGCGA CGCACTGATT ACGCGCCGGC ATCTGGAGAT CGTGCTGGTC ACGGCATCGC GGCTGAATGC GTGCCACTAC  TGCATCAGCC ATCACGTGCC AAGGCTGGAA GCGCTGGGCG TGACGCCCGA AACGGTAGAG CGGATCCTGG AGCCCGACGT GCCCGGGCTG GACGCCGTGG AGCGCCTGGT GCGCGACTAC  ACCGTGCAAG TCACGACGCA ACGCGTCACC GACACGGTGG TAGCGCGGCT GCGCGAGCAC TTCACCGAAG CGCAGGTCGT GGAGCTGACA CTGCGCGCGG CGCTGTGCGC ATTCTTCGCG 
CGCTTCAATG AAGCGCTGGA GATCCAGGTC GAGCCCGAAC TGCTGGCCGC CGAAATCCAC GCCACCTGA 

Retrieve as FASTA