Entry information : RsoAhpC_GMI1000
Entry ID 12502
Creation 2013-08-13 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: RsoAhpC_GMI1000
Name RsoAhpC_GMI1000
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoAhpC_GMI1000
start..stop
S start..stop
CtaiAhpC01_LMG19424 339 1e-120 49..230 1..182
LpnAhpC_Philadelphia-1 190 2e-61 45..230 30..209
ChAhpC 174 1e-55 89..230 42..183
SvAhpC 174 2e-55 41..230 3..185
Literature and cross-references RsoAhpC_GMI1000
Protein ref. UniProtKB:   Q8XYW0
DNA ref. GenBank:   NC_003295.1 (1770529..1769837)
Protein sequence: RsoAhpC_GMI1000
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   230
PWM (Da):   %s   25274.91  
PI (pH):   %s   5.67
Sequence
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Send to Peroxiscan
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MRPGTTDAWP IAAHSPIVAG RVRPPLACLA GALLVCRTPS AAPPQEKPMK TIGDKLEPFK VIGVKPGFNR HEENGQSAFE DITEASFPGK WKVIYFYPKD FTFVCPTEIV AFARLNQDFE 
DRDTVVLGGS TDNEFVKLAW RREHKDLDRL KQWSFADTTG ALIDQLGVRE HEAGVALRAT FIVDPDNVIQ HVSVNNLNVG RNPDEVLRIL DALQTDELCP CNRAVGGATL 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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ATGCGGCCGG GCACGACGGA TGCTTGGCCG ATTGCAGCAC ATTCACCCAT CGTTGCCGGC CGCGTCCGCC CGCCGCTTGC CTGCCTGGCC GGCGCGCTTC TTGTTTGCAG GACGCCGTCC  GCTGCGCCCC CTCAGGAGAA GCCCATGAAG ACCATTGGTG ACAAGCTCGA GCCGTTCAAG GTGATCGGTG TCAAGCCGGG GTTCAACCGC CATGAGGAAA ACGGCCAGTC GGCGTTCGAA  GACATCACTG AGGCATCGTT CCCGGGCAAG TGGAAGGTCA TCTATTTCTA CCCGAAGGAC TTCACCTTCG TGTGCCCGAC CGAGATCGTC GCCTTCGCCA GGCTGAATCA GGACTTCGAA  GACCGCGACA CCGTCGTGCT GGGCGGCTCG ACCGACAACG AATTCGTCAA GCTGGCCTGG CGCCGCGAGC ACAAGGACCT CGACCGGCTG AAGCAATGGT CGTTCGCCGA CACCACCGGC  GCGCTGATCG ACCAGCTGGG CGTGCGCGAG CACGAAGCCG GCGTCGCGCT GCGGGCCACG TTCATCGTCG ATCCGGACAA CGTGATCCAG CACGTCTCGG TGAACAACCT GAACGTGGGC 
CGCAACCCGG ATGAAGTCCT GCGCATCCTC GACGCCCTGC AGACCGACGA GCTGTGCCCG TGCAACCGCG CCGTCGGCGG CGCCACGCTC TGA 

Retrieve as FASTA  
CDS
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ATGCGGCCGG GCACGACGGA TGCTTGGCCG ATTGCAGCAC ATTCACCCAT CGTTGCCGGC CGCGTCCGCC CGCCGCTTGC CTGCCTGGCC GGCGCGCTTC TTGTTTGCAG GACGCCGTCC  GCTGCGCCCC CTCAGGAGAA GCCCATGAAG ACCATTGGTG ACAAGCTCGA GCCGTTCAAG GTGATCGGTG TCAAGCCGGG GTTCAACCGC CATGAGGAAA ACGGCCAGTC GGCGTTCGAA  GACATCACTG AGGCATCGTT CCCGGGCAAG TGGAAGGTCA TCTATTTCTA CCCGAAGGAC TTCACCTTCG TGTGCCCGAC CGAGATCGTC GCCTTCGCCA GGCTGAATCA GGACTTCGAA  GACCGCGACA CCGTCGTGCT GGGCGGCTCG ACCGACAACG AATTCGTCAA GCTGGCCTGG CGCCGCGAGC ACAAGGACCT CGACCGGCTG AAGCAATGGT CGTTCGCCGA CACCACCGGC  GCGCTGATCG ACCAGCTGGG CGTGCGCGAG CACGAAGCCG GCGTCGCGCT GCGGGCCACG TTCATCGTCG ATCCGGACAA CGTGATCCAG CACGTCTCGG TGAACAACCT GAACGTGGGC 
CGCAACCCGG ATGAAGTCCT GCGCATCCTC GACGCCCTGC AGACCGACGA GCTGTGCCCG TGCAACCGCG CCGTCGGCGG CGCCACGCTC TGA 

Retrieve as FASTA