Entry information : RsoDiHPOX01_GMI1000
Entry ID 12505
Creation 2013-08-14 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: RsoDiHPOX01_GMI1000
Name RsoDiHPOX01_GMI1000
Class Other di-haem peroxidase    [Orthogroup: DiHPOX001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoDiHPOX01_GMI1000
start..stop
S start..stop
RsoDiHPOX03_GMI1000 283 1e-91 70..439 41..417
BcenDiHPOX 259 3e-82 68..430 77..437
RsoDiHPOX02_GMI1000 258 4e-82 68..430 52..411
McapMauG 198 2e-59 71..434 37..389
Literature and cross-references RsoDiHPOX01_GMI1000
Protein ref. UniProtKB:   Q8XQP8
DNA ref. GenBank:   NC_003296.1 (1479152..1477827)
Protein sequence: RsoDiHPOX01_GMI1000
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   441 (422)
PWM (Da):   %s   47829.74 (45810.5) Transmb domain:   %s   i7-26o
PI (pH):   %s   8.07 (7.31) Peptide Signal:   %s   cut: 20 range:20-441
Sequence
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Send to Peroxiscan
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MRRLLSVASV RLLAVVALAF AGLSACGRGE LSEARAATPP AAAPQAGAAP AYEKAFYTMM ATRRPSVPAM AALGKALFFD PALSASGRLA CASCHSPAHA YGPPNDLSVQ PGGPEMNKTG  ARAAPSLRYL QNVPPFSEHF HENDGNDAED QGPTGGYNWD GRASSTHDQA RIPLLSAHEM ANGTPAGVVA RLRGGRHAQT FRQVFGNDIL DSEDTAFRAA LMALEVFQEA PSEFYPYDSK  YDAFLRKQAS LNPQEMRGLR LFNDPGKGNC ASCHTSTIKE DGAFPAFSDF GHIAVGVPRN RQLAANADPA FYDLGLCGPD RTDLTDRRDY CGRFRTPSLR NVALRKSFFH NGAIHSLEDA 
VRFYAQRDTQ PWKWYPRKPD GTLDTFDDLP PRYRANVNTE PPFGGKPGDR PVLSEAEVRD IVAFLKTLTD GYRPSRPVAK R 

Retrieve as FASTA  
Remarks Complete sequence from genomic (mega plasmid).
DNA
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ATGCGCCGCC TGCTTTCTGT CGCCTCTGTC CGCCTGTTGG CTGTCGTGGC GCTCGCGTTT GCCGGGCTGA GCGCATGCGG ACGCGGCGAG CTTTCCGAAG CGCGGGCCGC CACGCCGCCC  GCAGCTGCGC CGCAGGCCGG CGCGGCGCCG GCCTACGAGA AGGCCTTCTA CACGATGATG GCGACACGCC GTCCGTCCGT GCCCGCCATG GCGGCGCTGG GCAAGGCGCT GTTCTTCGAT  CCCGCGCTGT CCGCCTCGGG CCGGCTGGCC TGCGCCAGCT GCCACAGCCC GGCCCATGCC TACGGGCCGC CCAATGACCT GTCCGTCCAG CCCGGCGGCC CGGAGATGAA CAAGACCGGC  GCGCGCGCCG CGCCGTCGCT GCGCTATCTG CAGAACGTGC CGCCGTTCTC CGAGCACTTC CACGAGAACG ACGGCAACGA CGCCGAAGAC CAGGGCCCGA CCGGCGGCTA CAACTGGGAC  GGCCGCGCTT CGTCCACGCA CGACCAGGCG CGCATCCCGC TGCTCTCCGC GCACGAGATG GCCAACGGCA CGCCGGCCGG CGTGGTCGCC AGGCTGCGCG GCGGCCGGCA CGCGCAGACG  TTCCGCCAGG TGTTCGGCAA CGACATCCTC GACAGCGAAG ACACCGCCTT CCGCGCCGCG CTGATGGCGC TCGAGGTGTT CCAGGAAGCG CCGTCCGAGT TCTATCCGTA CGACAGCAAG  TACGACGCCT TCCTGCGCAA GCAGGCCAGC CTGAACCCGC AGGAGATGCG CGGCCTGCGG CTGTTCAACG ACCCGGGCAA GGGCAACTGC GCGTCGTGCC ACACCAGCAC CATCAAGGAA  GACGGCGCCT TCCCGGCCTT TTCGGATTTC GGCCACATTG CCGTCGGCGT GCCGCGCAAC CGGCAACTGG CGGCCAATGC CGATCCGGCC TTCTACGATC TCGGCCTGTG CGGCCCCGAC  CGGACCGACC TGACGGATCG CCGCGACTAC TGCGGACGCT TCCGCACGCC GTCGCTGCGC AACGTGGCGC TGCGCAAGTC CTTCTTCCAC AACGGCGCCA TCCACTCGCT GGAAGACGCG  GTGCGCTTCT ACGCGCAGCG CGATACGCAG CCCTGGAAGT GGTATCCGCG CAAGCCCGAC GGCACCCTCG ACACGTTCGA CGATCTGCCG CCGCGGTATC GCGCCAACGT CAACACGGAG  CCGCCCTTCG GCGGCAAGCC GGGTGACCGG CCCGTGCTGT CCGAGGCCGA GGTGCGCGAC ATCGTCGCCT TCCTCAAGAC CCTGACCGAC GGCTACCGCC CGAGCCGCCC GGTGGCCAAG 
CGTTGA 

Retrieve as FASTA  
CDS
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ATGCGCCGCC TGCTTTCTGT CGCCTCTGTC CGCCTGTTGG CTGTCGTGGC GCTCGCGTTT GCCGGGCTGA GCGCATGCGG ACGCGGCGAG CTTTCCGAAG CGCGGGCCGC CACGCCGCCC  GCAGCTGCGC CGCAGGCCGG CGCGGCGCCG GCCTACGAGA AGGCCTTCTA CACGATGATG GCGACACGCC GTCCGTCCGT GCCCGCCATG GCGGCGCTGG GCAAGGCGCT GTTCTTCGAT  CCCGCGCTGT CCGCCTCGGG CCGGCTGGCC TGCGCCAGCT GCCACAGCCC GGCCCATGCC TACGGGCCGC CCAATGACCT GTCCGTCCAG CCCGGCGGCC CGGAGATGAA CAAGACCGGC  GCGCGCGCCG CGCCGTCGCT GCGCTATCTG CAGAACGTGC CGCCGTTCTC CGAGCACTTC CACGAGAACG ACGGCAACGA CGCCGAAGAC CAGGGCCCGA CCGGCGGCTA CAACTGGGAC  GGCCGCGCTT CGTCCACGCA CGACCAGGCG CGCATCCCGC TGCTCTCCGC GCACGAGATG GCCAACGGCA CGCCGGCCGG CGTGGTCGCC AGGCTGCGCG GCGGCCGGCA CGCGCAGACG  TTCCGCCAGG TGTTCGGCAA CGACATCCTC GACAGCGAAG ACACCGCCTT CCGCGCCGCG CTGATGGCGC TCGAGGTGTT CCAGGAAGCG CCGTCCGAGT TCTATCCGTA CGACAGCAAG  TACGACGCCT TCCTGCGCAA GCAGGCCAGC CTGAACCCGC AGGAGATGCG CGGCCTGCGG CTGTTCAACG ACCCGGGCAA GGGCAACTGC GCGTCGTGCC ACACCAGCAC CATCAAGGAA  GACGGCGCCT TCCCGGCCTT TTCGGATTTC GGCCACATTG CCGTCGGCGT GCCGCGCAAC CGGCAACTGG CGGCCAATGC CGATCCGGCC TTCTACGATC TCGGCCTGTG CGGCCCCGAC  CGGACCGACC TGACGGATCG CCGCGACTAC TGCGGACGCT TCCGCACGCC GTCGCTGCGC AACGTGGCGC TGCGCAAGTC CTTCTTCCAC AACGGCGCCA TCCACTCGCT GGAAGACGCG  GTGCGCTTCT ACGCGCAGCG CGATACGCAG CCCTGGAAGT GGTATCCGCG CAAGCCCGAC GGCACCCTCG ACACGTTCGA CGATCTGCCG CCGCGGTATC GCGCCAACGT CAACACGGAG  CCGCCCTTCG GCGGCAAGCC GGGTGACCGG CCCGTGCTGT CCGAGGCCGA GGTGCGCGAC ATCGTCGCCT TCCTCAAGAC CCTGACCGAC GGCTACCGCC CGAGCCGCCC GGTGGCCAAG 
CGTTGA 

Retrieve as FASTA