Entry information : RsoCMD01_GMI1000
Entry ID 12506
Creation 2013-08-14 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: RsoCMD01_GMI1000
Name RsoCMD01_GMI1000
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD004]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoCMD01_GMI1000
start..stop
S start..stop
CtaiCMD01_LMG19424 338 1e-120 1..197 1..197
CtesDCMD 265 9e-89 3..192 207..396
CtaiDCMD01_LMG19424 70 0.000000000000002 36..188 27..179
RsoDCMD01 60 0.000000000008 53..183 48..179
Literature and cross-references RsoCMD01_GMI1000
Protein ref. UniProtKB:   Q8XY75
DNA ref. GenBank:   NC_003295.1 (2073392..2073985)
Protein sequence: RsoCMD01_GMI1000
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   197
PWM (Da):   %s   21832.23  
PI (pH):   %s   5.94
Sequence
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Send to Peroxiscan
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MTEPLRAHGF TNATLEWKAW LDVVDLDRAT PGQIAVLEES HPKAKTSDYY RFLVHQPEIL RQRSAAFNAI MYAPGGLSRA ERELASTVVS RVNGCVYCAA VHAQRFEQLA KRNDVIRQVF 
EDPHTAGTNA RERAIARFSI DLTLRPGDVR AEDLQPLQAA GLTDAEILDL IHAVAIFAWA NRLMLNLGEP VFPDEAA 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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ATGACCGAGC CCCTGCGCGC CCACGGCTTC ACCAACGCAA CCCTGGAATG GAAAGCCTGG CTGGACGTGG TCGACCTCGA CCGCGCCACG CCCGGGCAAA TCGCCGTGCT GGAAGAGAGC  CACCCGAAGG CCAAGACGTC GGACTACTAC CGCTTTCTGG TGCACCAGCC GGAAATCCTG CGCCAGCGCT CGGCGGCCTT CAACGCCATC ATGTATGCAC CCGGCGGGCT GTCGCGCGCG  GAGCGCGAAC TGGCCAGCAC CGTGGTCTCG CGCGTTAACG GCTGCGTCTA CTGCGCCGCC GTCCATGCGC AGCGCTTCGA GCAGCTCGCC AAGCGCAACG ACGTCATCCG GCAGGTCTTC  GAAGACCCGC ACACAGCCGG CACCAATGCG CGCGAACGGG CCATCGCCCG GTTCTCGATC GACCTCACGC TGCGCCCCGG CGACGTGCGC GCCGAAGACC TGCAGCCGCT CCAGGCCGCC 
GGCCTGACCG ATGCCGAGAT CCTCGACCTG ATCCACGCCG TCGCCATCTT CGCGTGGGCG AACCGGCTGA TGCTGAACCT GGGCGAGCCG GTGTTCCCGG ACGAAGCCGC GTAG 

Retrieve as FASTA  
CDS
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ATGACCGAGC CCCTGCGCGC CCACGGCTTC ACCAACGCAA CCCTGGAATG GAAAGCCTGG CTGGACGTGG TCGACCTCGA CCGCGCCACG CCCGGGCAAA TCGCCGTGCT GGAAGAGAGC  CACCCGAAGG CCAAGACGTC GGACTACTAC CGCTTTCTGG TGCACCAGCC GGAAATCCTG CGCCAGCGCT CGGCGGCCTT CAACGCCATC ATGTATGCAC CCGGCGGGCT GTCGCGCGCG  GAGCGCGAAC TGGCCAGCAC CGTGGTCTCG CGCGTTAACG GCTGCGTCTA CTGCGCCGCC GTCCATGCGC AGCGCTTCGA GCAGCTCGCC AAGCGCAACG ACGTCATCCG GCAGGTCTTC  GAAGACCCGC ACACAGCCGG CACCAATGCG CGCGAACGGG CCATCGCCCG GTTCTCGATC GACCTCACGC TGCGCCCCGG CGACGTGCGC GCCGAAGACC TGCAGCCGCT CCAGGCCGCC 
GGCCTGACCG ATGCCGAGAT CCTCGACCTG ATCCACGCCG TCGCCATCTT CGCGTGGGCG AACCGGCTGA TGCTGAACCT GGGCGAGCCG GTGTTCCCGG ACGAAGCCGC GTAG 

Retrieve as FASTA