Entry information : RsoDiHPOX02_GMI1000
Entry ID 12507
Creation 2013-08-14 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: RsoDiHPOX02_GMI1000
Name RsoDiHPOX02_GMI1000
Class Other di-haem peroxidase    [Orthogroup: DiHPOX001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoDiHPOX02_GMI1000
start..stop
S start..stop
BcenDiHPOX 570 0 19..415 41..441
RsoDiHPOX01_GMI1000 258 5e-82 52..411 68..430
RsoDiHPOX03_GMI1000 231 3e-71 54..443 41..436
CpsDiHPOX 186 2e-55 54..411 21..352
Literature and cross-references RsoDiHPOX02_GMI1000
Protein ref. UniProtKB:   Q8XWI1
DNA ref. GenBank:   NC_003295.1 (2699722..2701071)
Protein sequence: RsoDiHPOX02_GMI1000
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   449 (423)
PWM (Da):   %s   48493.41 (45969.1)  
PI (pH):   %s   9.6 (9.21) Peptide Signal:   %s   cut: 27 range:27-449
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSGSTIWRRV AGTAMLVAAL VPGAAGAGSV GDTPRLDAVP PPAEAASFRP DPNLVALGKR VFFDPRLSEP RGTACAACHD PARAFAPTLT GEALHAGVPA GSRPGHLAPR SAPSLLYIRY  LPRRYFFQDD DASFPSPFGG FFADGRADSI AEQIRGPLFS PDEMGNRSPR ALLRKVAGTD LGEALARQFG AGAVRDPERM ISALGQALEA YFRSDEMAPF SSRFDAFLRH RAPLSPAEMR  GLALFRNPDK GNCAACHTMV ESSSRPERSL FTDFGYDAIA APRNPLLPAN RDPRHFDLGL CRTARALKWP EPDQWCGYFR TAGLRNVAVR QTFMHNGVFR TLRDAVAFYA TRSTDPAQWY 
PGGRRFDDVP ARHQGNVNVN AVPMNRRQGT APALTDDEID DIVAFLRTLT DARYVARMPD PAADKARPAQ APGPAGPTVA AERRAANTP 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCGGAT CGACGATCTG GCGCCGCGTC GCCGGCACTG CCATGCTGGT CGCCGCGCTC GTCCCGGGTG CGGCGGGGGC CGGATCGGTC GGCGACACGC CCAGGCTGGA TGCCGTGCCG  CCGCCCGCCG AAGCCGCGTC GTTCCGGCCG GACCCGAACC TGGTCGCGCT GGGCAAGCGG GTGTTCTTCG ATCCGCGCCT GTCGGAGCCG CGGGGCACCG CGTGCGCGGC GTGCCACGAT  CCGGCGCGCG CCTTCGCCCC GACGCTGACC GGCGAGGCGC TGCACGCCGG CGTGCCGGCC GGCAGCCGCC CGGGGCATCT GGCGCCGCGC AGCGCGCCGT CGCTTCTGTA CATCCGGTAC  CTTCCGCGCC GCTACTTCTT CCAGGACGAC GACGCCAGCT TCCCCTCGCC GTTCGGTGGC TTCTTCGCCG ACGGGCGCGC CGATTCCATC GCCGAGCAGA TCCGCGGGCC GCTGTTCAGC  CCGGACGAAA TGGGCAACCG CTCGCCGCGC GCGCTGCTGC GCAAGGTAGC CGGGACCGAC CTCGGCGAGG CGCTTGCGCG GCAGTTCGGC GCCGGGGCCG TGCGCGATCC CGAGCGGATG  ATCAGCGCGC TCGGCCAGGC GCTGGAGGCG TATTTCCGCA GCGACGAAAT GGCGCCCTTC AGCTCGCGCT TCGACGCGTT CCTGCGCCAC CGCGCGCCGC TGTCGCCGGC CGAGATGCGC  GGACTGGCGC TGTTCCGCAA CCCGGACAAG GGCAACTGCG CGGCGTGCCA CACCATGGTG GAGTCGTCGT CGCGGCCGGA GCGCTCGCTG TTCACCGATT TCGGCTACGA CGCCATCGCA  GCGCCGCGCA ACCCGCTGCT GCCGGCCAAC CGGGATCCGC GGCACTTCGA TCTCGGCCTG TGCCGCACCG CGCGCGCGCT CAAGTGGCCC GAACCCGACC AGTGGTGCGG CTATTTCCGC  ACCGCCGGGC TGCGCAACGT GGCCGTGCGC CAGACCTTCA TGCACAACGG CGTATTCCGC ACGCTGCGCG ACGCCGTGGC CTTCTATGCC ACGCGCTCGA CCGATCCGGC CCAGTGGTAT  CCGGGCGGCC GGCGCTTCGA CGACGTGCCC GCCCGCCACC AGGGCAATGT CAACGTGAAC GCCGTGCCGA TGAACCGCCG CCAGGGCACG GCGCCGGCGC TGACCGACGA CGAGATCGAC  GACATCGTCG CCTTCCTGCG CACCCTGACC GACGCGCGCT ACGTGGCGCG GATGCCCGAC CCGGCTGCGG ACAAGGCCCG CCCGGCACAG GCCCCGGGGC CCGCCGGACC GACGGTCGCC 
GCCGAACGCC GCGCCGCCAA TACGCCGTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCGGAT CGACGATCTG GCGCCGCGTC GCCGGCACTG CCATGCTGGT CGCCGCGCTC GTCCCGGGTG CGGCGGGGGC CGGATCGGTC GGCGACACGC CCAGGCTGGA TGCCGTGCCG  CCGCCCGCCG AAGCCGCGTC GTTCCGGCCG GACCCGAACC TGGTCGCGCT GGGCAAGCGG GTGTTCTTCG ATCCGCGCCT GTCGGAGCCG CGGGGCACCG CGTGCGCGGC GTGCCACGAT  CCGGCGCGCG CCTTCGCCCC GACGCTGACC GGCGAGGCGC TGCACGCCGG CGTGCCGGCC GGCAGCCGCC CGGGGCATCT GGCGCCGCGC AGCGCGCCGT CGCTTCTGTA CATCCGGTAC  CTTCCGCGCC GCTACTTCTT CCAGGACGAC GACGCCAGCT TCCCCTCGCC GTTCGGTGGC TTCTTCGCCG ACGGGCGCGC CGATTCCATC GCCGAGCAGA TCCGCGGGCC GCTGTTCAGC  CCGGACGAAA TGGGCAACCG CTCGCCGCGC GCGCTGCTGC GCAAGGTAGC CGGGACCGAC CTCGGCGAGG CGCTTGCGCG GCAGTTCGGC GCCGGGGCCG TGCGCGATCC CGAGCGGATG  ATCAGCGCGC TCGGCCAGGC GCTGGAGGCG TATTTCCGCA GCGACGAAAT GGCGCCCTTC AGCTCGCGCT TCGACGCGTT CCTGCGCCAC CGCGCGCCGC TGTCGCCGGC CGAGATGCGC  GGACTGGCGC TGTTCCGCAA CCCGGACAAG GGCAACTGCG CGGCGTGCCA CACCATGGTG GAGTCGTCGT CGCGGCCGGA GCGCTCGCTG TTCACCGATT TCGGCTACGA CGCCATCGCA  GCGCCGCGCA ACCCGCTGCT GCCGGCCAAC CGGGATCCGC GGCACTTCGA TCTCGGCCTG TGCCGCACCG CGCGCGCGCT CAAGTGGCCC GAACCCGACC AGTGGTGCGG CTATTTCCGC  ACCGCCGGGC TGCGCAACGT GGCCGTGCGC CAGACCTTCA TGCACAACGG CGTATTCCGC ACGCTGCGCG ACGCCGTGGC CTTCTATGCC ACGCGCTCGA CCGATCCGGC CCAGTGGTAT  CCGGGCGGCC GGCGCTTCGA CGACGTGCCC GCCCGCCACC AGGGCAATGT CAACGTGAAC GCCGTGCCGA TGAACCGCCG CCAGGGCACG GCGCCGGCGC TGACCGACGA CGAGATCGAC  GACATCGTCG CCTTCCTGCG CACCCTGACC GACGCGCGCT ACGTGGCGCG GATGCCCGAC CCGGCTGCGG ACAAGGCCCG CCCGGCACAG GCCCCGGGGC CCGCCGGACC GACGGTCGCC 
GCCGAACGCC GCGCCGCCAA TACGCCGTAA 

Retrieve as FASTA