Entry information : RsoDiHPOX03_GMI1000
Entry ID 12508
Creation 2013-08-14 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: RsoDiHPOX03_GMI1000
Name RsoDiHPOX03_GMI1000
Class Other di-haem peroxidase    [Orthogroup: DiHPOX001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoDiHPOX03_GMI1000
start..stop
S start..stop
RsoDiHPOX01_GMI1000 283 1e-91 41..417 70..439
RsoDiHPOX02_GMI1000 237 9e-74 5..436 7..443
BcenDiHPOX 230 1e-70 16..408 51..437
McapMauG 223 8e-69 38..412 33..389
Literature and cross-references RsoDiHPOX03_GMI1000
Protein ref. UniProtKB:   Q8XRW3
DNA ref. GenBank:   NC_003296.1 (905466..906830)
Protein sequence: RsoDiHPOX03_GMI1000
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   454 (435)
PWM (Da):   %s   47190.79 (45275.8)  
PI (pH):   %s   4.98 (4.74) Peptide Signal:   %s   cut: 20 range:20-454
Sequence
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Send to Peroxiscan
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MRVAWRIAGG LACAAMVSAC GGGGDSGGSG STAAAAALSP MAQVGKAIFF DPALSASGKQ SCASCHDPAR AFTDPNNLAV SIGGPNADLP GLRNAPSLNY ASFTPNFQVD GTGTASGGFF  RDGRSPSLMD QAQQPFTNAF EMANGSADDV LKSLLTRPYL DQLTAVFTKA GIQDSATAMQ SIGRALAAYQ AEDPGFHTFD SKYDAYLAGK ATLTDSEMRG LLLFNNPTKG NCNACHVSSR  TGGTPALFTD FTYDNVGIPR NWSLAANQEG TTLPYVPKNG LALGAPNYSY YDLGLCGPLR TDFRVGGATC GQFKVPTLRN IARTPPYFHN GVFQTLDQVV AWYVTRDTDP GRWYVKADGT 
PDVPYNDLPV AFDANVNVSE VPYNPAAAPS MTSQEISDVV HFLCALTDGF DPANPSAYSV PAQCQSSTAD SVAAARIQSV PAAGATAAKA SPSR 

Retrieve as FASTA  
Remarks Complete sequence from genomic (mega plasmid).
DNA
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ATGCGGGTCG CATGGCGCAT CGCGGGAGGG CTCGCTTGCG CGGCCATGGT CAGCGCATGC GGCGGGGGCG GGGACAGCGG TGGTTCCGGC AGCACCGCGG CGGCGGCGGC CCTGTCGCCG  ATGGCGCAGG TCGGCAAGGC GATCTTCTTC GACCCGGCGC TGTCGGCCTC GGGCAAGCAA TCGTGCGCGT CGTGCCATGA TCCGGCGCGC GCCTTCACCG ACCCGAACAA CCTGGCCGTG  TCGATCGGCG GGCCGAATGC CGACCTGCCC GGGCTGCGCA ACGCGCCGTC GCTGAACTAC GCTTCGTTCA CCCCGAACTT CCAGGTTGAC GGCACCGGCA CGGCCTCCGG CGGCTTCTTC  CGCGACGGCC GCTCGCCGTC GTTGATGGAC CAGGCGCAGC AGCCGTTCAC CAACGCATTC GAGATGGCCA ATGGCTCGGC GGACGACGTG CTCAAGTCGC TGCTGACGCG GCCGTACCTC  GATCAGCTCA CGGCCGTGTT CACCAAGGCG GGCATCCAGG ACAGCGCAAC GGCGATGCAG AGCATCGGTC GCGCACTGGC CGCCTACCAG GCCGAAGACC CGGGCTTCCA CACCTTCGAC  AGCAAGTACG ACGCATACCT GGCCGGCAAG GCAACGCTCA CGGATTCGGA GATGCGCGGC CTGCTGCTGT TCAACAACCC GACCAAGGGC AACTGCAACG CGTGCCATGT CTCGTCGCGC  ACCGGCGGCA CGCCCGCGCT GTTTACCGAC TTCACGTACG ACAACGTCGG CATTCCGCGC AACTGGAGCC TCGCCGCCAA CCAAGAAGGC ACCACGCTGC CCTACGTGCC GAAGAACGGC  CTGGCGCTCG GCGCCCCCAA CTACAGCTAC TACGACCTCG GCCTCTGCGG CCCGCTGCGC ACCGACTTCC GCGTGGGCGG CGCGACGTGC GGCCAGTTCA AGGTGCCGAC GCTGCGCAAC  ATCGCGCGCA CGCCGCCGTA TTTCCACAAC GGCGTGTTCC AGACGCTGGA CCAGGTGGTG GCCTGGTACG TCACGCGCGA TACCGACCCG GGGCGCTGGT ACGTCAAGGC CGACGGCACA  CCCGACGTGC CGTACAACGA CCTGCCGGTC GCCTTCGACG CCAACGTGAA CGTGTCGGAA GTGCCGTACA ACCCGGCCGC CGCCCCGTCG ATGACGAGCC AGGAGATCAG CGACGTGGTG  CATTTCCTGT GCGCGCTGAC CGACGGGTTC GACCCGGCCA ATCCGTCCGC CTACAGCGTG CCGGCGCAGT GCCAGTCGTC GACGGCCGAC AGCGTGGCGG CCGCGCGCAT CCAATCCGTC 
CCGGCGGCCG GAGCCACGGC CGCCAAGGCG AGCCCATCCA GATAA 

Retrieve as FASTA  
CDS
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ATGCGGGTCG CATGGCGCAT CGCGGGAGGG CTCGCTTGCG CGGCCATGGT CAGCGCATGC GGCGGGGGCG GGGACAGCGG TGGTTCCGGC AGCACCGCGG CGGCGGCGGC CCTGTCGCCG  ATGGCGCAGG TCGGCAAGGC GATCTTCTTC GACCCGGCGC TGTCGGCCTC GGGCAAGCAA TCGTGCGCGT CGTGCCATGA TCCGGCGCGC GCCTTCACCG ACCCGAACAA CCTGGCCGTG  TCGATCGGCG GGCCGAATGC CGACCTGCCC GGGCTGCGCA ACGCGCCGTC GCTGAACTAC GCTTCGTTCA CCCCGAACTT CCAGGTTGAC GGCACCGGCA CGGCCTCCGG CGGCTTCTTC  CGCGACGGCC GCTCGCCGTC GTTGATGGAC CAGGCGCAGC AGCCGTTCAC CAACGCATTC GAGATGGCCA ATGGCTCGGC GGACGACGTG CTCAAGTCGC TGCTGACGCG GCCGTACCTC  GATCAGCTCA CGGCCGTGTT CACCAAGGCG GGCATCCAGG ACAGCGCAAC GGCGATGCAG AGCATCGGTC GCGCACTGGC CGCCTACCAG GCCGAAGACC CGGGCTTCCA CACCTTCGAC  AGCAAGTACG ACGCATACCT GGCCGGCAAG GCAACGCTCA CGGATTCGGA GATGCGCGGC CTGCTGCTGT TCAACAACCC GACCAAGGGC AACTGCAACG CGTGCCATGT CTCGTCGCGC  ACCGGCGGCA CGCCCGCGCT GTTTACCGAC TTCACGTACG ACAACGTCGG CATTCCGCGC AACTGGAGCC TCGCCGCCAA CCAAGAAGGC ACCACGCTGC CCTACGTGCC GAAGAACGGC  CTGGCGCTCG GCGCCCCCAA CTACAGCTAC TACGACCTCG GCCTCTGCGG CCCGCTGCGC ACCGACTTCC GCGTGGGCGG CGCGACGTGC GGCCAGTTCA AGGTGCCGAC GCTGCGCAAC  ATCGCGCGCA CGCCGCCGTA TTTCCACAAC GGCGTGTTCC AGACGCTGGA CCAGGTGGTG GCCTGGTACG TCACGCGCGA TACCGACCCG GGGCGCTGGT ACGTCAAGGC CGACGGCACA  CCCGACGTGC CGTACAACGA CCTGCCGGTC GCCTTCGACG CCAACGTGAA CGTGTCGGAA GTGCCGTACA ACCCGGCCGC CGCCCCGTCG ATGACGAGCC AGGAGATCAG CGACGTGGTG  CATTTCCTGT GCGCGCTGAC CGACGGGTTC GACCCGGCCA ATCCGTCCGC CTACAGCGTG CCGGCGCAGT GCCAGTCGTC GACGGCCGAC AGCGTGGCGG CCGCGCGCAT CCAATCCGTC 
CCGGCGGCCG GAGCCACGGC CGCCAAGGCG AGCCCATCCA GATAA 

Retrieve as FASTA