Entry information : PabPrx108 (MA_163g0010)
Entry ID 12650
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2017-06-08 (Justine Latour)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-06-08 (Justine Latour)
Peroxidase information: PabPrx108 (MA_163g0010)
Name (synonym) PabPrx108 (MA_163g0010)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx108
start..stop
S start..stop
PabPrx152 607 0 1..326 1..326
PtaPrx09 569 0 1..326 1..324
PabPrx101 551 0 1..326 1..327
PabPrx122 549 0 26..326 25..325
Literature and cross-references PabPrx108 (MA_163g0010)
Protein sequence: PabPrx108 (MA_163g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326
PWM (Da):   %s   34862.55 Transmb domain:   %s   i7-29o
PI (pH):   %s   8.04
Sequence
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Send to Peroxiscan
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MKTVTVRNLF TAVASFCVFV CVFADAGGGL SLNFYEKTCP EVCNTVENVV GDYISRAPSL AAPLLRMHFH DCFVRGCDGS VLLNSTTSTK AEKDAIPNLS LRGFQVIDAA KAAVEKVCPG  VVSCADILAL VARDAVDMLG GPFWNVPTGR RDGVVSIANE ALTKLPPPFG NFSRLTSIFA AVGLDVKDLV VLSGAHTIGI SHCTSFTNRL YNFTGKGDMD PSLDKFYAAQ LKIKCKPGDS 
TTIVEMDPGS SKTFDTQYYV NLKKRRGLFQ SDAALLTNNE AQAYVNTDLQ GSSFFSDFAR SMEKMGKIGV LTGSAGQIRG RCAFTN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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ATGAAGACAG TTACAGTTAG AAATCTGTTT ACGGCAGTTG CGAGTTTCTG TGTATTTGTC TGTGTGTTTG CAGATGCAGG TGGAGGACTC TCACTGAACT TCTATGAGAA GACCTGCCCC  GAAGTTTGTA ATACAGTCGA AAATGTAGTG GGAGACTACA TATCCAGAGC ACCAAGTCTG GCCGCGCCGC TTCTCAGAAT GCATTTTCAT GACTGCTTTG TTAGAGTGAG TATATTTAAG  TCTACACCCA GGCTATTCAA CAATATATAT ATGTCTAGGT AATGCTGCAC TGAAGGAGCA TAGCATTTAG AGCATTTTTT GGATCAATAA ATTGATACGT TTATCTGGCT GAAGGGTTGC  GATGGATCGG TGCTCTTGAA TTCAACAACT TCAACGAAAG CAGAAAAGGA CGCGATTCCG AATCTGAGCC TGAGAGGATT CCAAGTCATT GATGCAGCCA AAGCTGCAGT GGAGAAGGTA  TGCCCGGGAG TGGTGTCATG CGCCGATATT CTTGCACTCG TCGCACGAGA TGCTGTCGAT ATGGTAACAC TCCTCTTCAA TCATACTGCG TGCCTTGATT TTCTTTCCCC TTCAAATGTC  GATTTTAGCT CGGCAGCCTC TAAGATGATA TTTAATTCAT GTAAACAGTT GGGTGGACCT TTCTGGAACG TTCCAACGGG ACGTAGAGAT GGAGTGGTGT CTATCGCGAA CGAAGCTCTC  ACTAAACTTC CTCCGCCCTT CGGGAATTTC TCGCGACTCA CATCAATATT TGCGGCCGTT GGTCTTGATG TTAAGGACCT GGTTGTGTTA TCAGGTAAGT AATTCAATAC TTTCCATACT  CCACGTCCAT TCTTTTCCGA CCTGTTATAC GGGGATTGAT TTATATTATG GCATCGTAAT CTCGTGAGTT ATATATAACA ATACTGGGTG CAGGCGCCCA CACTATAGGG ATTTCCCACT  GCACCTCCTT TACCAACAGG CTTTACAATT TTACTGGAAA AGGAGATATG GATCCGTCCT TGGACAAATT TTATGCCGCT CAACTGAAGA TAAAATGCAA GCCTGGGGAC AGTACGACAA  TAGTAGAGAT GGATCCCGGT AGCTCTAAAA CATTTGATAC GCAGTATTAC GTGAATTTAA AGAAGCGCAG AGGCCTCTTT CAATCTGATG CTGCTCTTCT GACCAACAAC GAAGCACAAG  CATATGTCAA TACAGATTTG CAGGGCTCGT CATTTTTCTC AGATTTTGCA AGGTCGATGG AGAAGATGGG AAAAATTGGT GTGCTCACGG GCAGTGCAGG GCAAATCCGA GGACGCTGCG 
CTTTTACAAA TTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGACAG TTACAGTTAG AAATCTGTTT ACGGCAGTTG CGAGTTTCTG TGTATTTGTC TGTGTGTTTG CAGATGCAGG TGGAGGACTC TCACTGAACT TCTATGAGAA GACCTGCCCC  GAAGTTTGTA ATACAGTCGA AAATGTAGTG GGAGACTACA TATCCAGAGC ACCAAGTCTG GCCGCGCCGC TTCTCAGAAT GCATTTTCAT GACTGCTTTG TTAGAGGTTG CGATGGATCG  GTGCTCTTGA ATTCAACAAC TTCAACGAAA GCAGAAAAGG ACGCGATTCC GAATCTGAGC CTGAGAGGAT TCCAAGTCAT TGATGCAGCC AAAGCTGCAG TGGAGAAGGT ATGCCCGGGA  GTGGTGTCAT GCGCCGATAT TCTTGCACTC GTCGCACGAG ATGCTGTCGA TATGTTGGGT GGACCTTTCT GGAACGTTCC AACGGGACGT AGAGATGGAG TGGTGTCTAT CGCGAACGAA  GCTCTCACTA AACTTCCTCC GCCCTTCGGG AATTTCTCGC GACTCACATC AATATTTGCG GCCGTTGGTC TTGATGTTAA GGACCTGGTT GTGTTATCAG GCGCCCACAC TATAGGGATT  TCCCACTGCA CCTCCTTTAC CAACAGGCTT TACAATTTTA CTGGAAAAGG AGATATGGAT CCGTCCTTGG ACAAATTTTA TGCCGCTCAA CTGAAGATAA AATGCAAGCC TGGGGACAGT  ACGACAATAG TAGAGATGGA TCCCGGTAGC TCTAAAACAT TTGATACGCA GTATTACGTG AATTTAAAGA AGCGCAGAGG CCTCTTTCAA TCTGATGCTG CTCTTCTGAC CAACAACGAA  GCACAAGCAT ATGTCAATAC AGATTTGCAG GGCTCGTCAT TTTTCTCAGA TTTTGCAAGG TCGATGGAGA AGATGGGAAA AATTGGTGTG CTCACGGGCA GTGCAGGGCA AATCCGAGGA 
CGCTGCGCTT TTACAAATTA A 

Retrieve as FASTA