Entry information : PabPrx170 (MA_5316g0010)
Entry ID 12703
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2017-06-09 (Justine Latour)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-06-09 (Justine Latour)
Peroxidase information: PabPrx170 (MA_5316g0010)
Name (synonym) PabPrx170 (MA_5316g0010)
Class Class III peroxidase    [Orthogroup: Prx083]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx170
start..stop
S start..stop
PabPrx91 628 0 1..339 1..339
PabPrx159 599 0 1..339 1..339
PabPrx212 596 0 1..339 1..339
PabPrx74 593 0 1..339 1..333
Literature and cross-references PabPrx170 (MA_5316g0010)
Protein sequence: PabPrx170 (MA_5316g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339
PWM (Da):   %s   36552.54 Transmb domain:   %s   i12-34o
PI (pH):   %s   8.63
Sequence
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Send to Peroxiscan
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MDYRSIDHRC LLNLIVAIVI VAVLSPPVIV ANANGLKVGY YRHRCPEAEA IVSAAVAKAV RANPGVAPSL IRMHFHDCFV RGCDGSILID STPGNQAEKD SPVNNPSLQG FEVIDEAKSI  LEAKCPNVVS CADILAFAAR DSAYQAGGLI WEVEAGRKDG RISRASDIPG NIPAPQFNVN RLKQNFAAKH MSQEDMVTLS GAHSIGVSHC SSFSANRLYN FSGTGRQDPS MDPGFASSLK 
AKCPIQNSNS NSDPTVPLDS LTPSILDEKY YADLEVKRGV LTSDQTLMSN PSTSRMVKIN SKYPSIWRKK FGRAMVKMGS IDVLTGSHGE IRKVCRILN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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ATGGATTATC GATCAATTGA TCATCGCTGT TTACTTAATT TAATAGTAGC AATCGTAATA GTAGCAGTGT TATCTCCCCC TGTAATAGTA GCAAATGCGA ATGGATTAAA GGTGGGTTAT  TACCGTCATA GGTGCCCCGA GGCGGAGGCA ATTGTAAGTG CAGCTGTGGC GAAAGCCGTG AGAGCAAATC CTGGCGTTGC ACCTTCTCTT ATCAGGATGC ACTTCCACGA CTGCTTTGTG  AGAGTAAGTA TATCAACTCC CAAAACAATC AGTAGTATAT ATCAATTTCA TGAATAAGAT AAATAGCTAA TTAATACGCT TACAGGGATG TGATGGATCA ATACTGATCG ACTCCACGCC  GGGAAATCAA GCAGAGAAAG ACTCGCCGGT AAACAATCCG AGCCTTCAAG GGTTCGAAGT CATTGACGAA GCAAAGTCTA TATTGGAAGC CAAATGTCCG AATGTGGTCT CATGTGCAGA  CATCCTTGCT TTCGCTGCAA GAGATAGCGC TTACCAGGTG GGTGATTAAT CCTCAATATT GTTATTGCCA TGGTTAATAT TCAAGTGGGT AACTATATAT CTATATAGAT ATTGATGATA  TTGTATATTG GCTCAGGCTG GAGGATTAAT TTGGGAGGTG GAAGCAGGAC GAAAAGACGG AAGGATCTCT CGAGCATCAG ACATCCCAGG GAATATACCT GCTCCACAAT TCAATGTAAA  CCGACTGAAG CAAAATTTTG CTGCAAAACA CATGTCCCAG GAAGACATGG TCACTCTATC AGGTAGCTAC TAATTATCTA TCACAAGCAT TCATATAATT GTGTAATTCA GTTGAACGCA  TGGCATCCCG TCATCATATT CATGCCTTAA TATAATTTAA TCTTCTATTA ATTTGCAGGG GCGCACTCTA TCGGGGTTTC GCATTGCTCT TCATTCAGTG CAAATAGGCT TTACAATTTC  AGTGGAACAG GTCGACAGGA CCCCAGTATG GACCCTGGAT TCGCTTCGTC TCTGAAAGCC AAATGCCCAA TACAAAATTC TAATTCAAAC TCTGATCCCA CCGTGCCTTT GGATTCATTA  ACACCCAGTA TTTTAGATGA GAAATATTAC GCGGATCTTG AGGTAAAGCG TGGAGTGTTG ACCTCTGATC AAACGTTGAT GTCGAATCCA TCCACTTCCA GAATGGTGAA GATAAACTCC 
AAGTATCCGT CCATTTGGAG AAAGAAGTTT GGGAGAGCAA TGGTGAAAAT GGGCTCAATA GACGTGTTGA CTGGGTCGCA TGGGGAGATC AGGAAAGTTT GCCGCATCCT CAACTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATTATC GATCAATTGA TCATCGCTGT TTACTTAATT TAATAGTAGC AATCGTAATA GTAGCAGTGT TATCTCCCCC TGTAATAGTA GCAAATGCGA ATGGATTAAA GGTGGGTTAT  TACCGTCATA GGTGCCCCGA GGCGGAGGCA ATTGTAAGTG CAGCTGTGGC GAAAGCCGTG AGAGCAAATC CTGGCGTTGC ACCTTCTCTT ATCAGGATGC ACTTCCACGA CTGCTTTGTG  AGAGGATGTG ATGGATCAAT ACTGATCGAC TCCACGCCGG GAAATCAAGC AGAGAAAGAC TCGCCGGTAA ACAATCCGAG CCTTCAAGGG TTCGAAGTCA TTGACGAAGC AAAGTCTATA  TTGGAAGCCA AATGTCCGAA TGTGGTCTCA TGTGCAGACA TCCTTGCTTT CGCTGCAAGA GATAGCGCTT ACCAGGCTGG AGGATTAATT TGGGAGGTGG AAGCAGGACG AAAAGACGGA  AGGATCTCTC GAGCATCAGA CATCCCAGGG AATATACCTG CTCCACAATT CAATGTAAAC CGACTGAAGC AAAATTTTGC TGCAAAACAC ATGTCCCAGG AAGACATGGT CACTCTATCA  GGGGCGCACT CTATCGGGGT TTCGCATTGC TCTTCATTCA GTGCAAATAG GCTTTACAAT TTCAGTGGAA CAGGTCGACA GGACCCCAGT ATGGACCCTG GATTCGCTTC GTCTCTGAAA  GCCAAATGCC CAATACAAAA TTCTAATTCA AACTCTGATC CCACCGTGCC TTTGGATTCA TTAACACCCA GTATTTTAGA TGAGAAATAT TACGCGGATC TTGAGGTAAA GCGTGGAGTG  TTGACCTCTG ATCAAACGTT GATGTCGAAT CCATCCACTT CCAGAATGGT GAAGATAAAC TCCAAGTATC CGTCCATTTG GAGAAAGAAG TTTGGGAGAG CAATGGTGAA AATGGGCTCA 
ATAGACGTGT TGACTGGGTC GCATGGGGAG ATCAGGAAAG TTTGCCGCAT CCTCAACTGA 

Retrieve as FASTA