Entry information : PabPrx20
Entry ID 12727
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2018-04-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-09-30 (Bruno Savelli)
Peroxidase information: PabPrx20
Name PabPrx20
Class Class III peroxidase    [Orthogroup: Prx201]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx20
start..stop
S start..stop
PabPrx82 574 0 13..328 1..316
PtaPrx34 551 0 13..328 1..316
PtaPrx30 477 2e-171 19..328 5..318
PabPrx79 476 3e-171 14..328 6..318
Literature and cross-references PabPrx20
Protein sequence: PabPrx20
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (294)
PWM (Da):   %s   35068.45 (31325.6)  
PI (pH):   %s   8.16 (8.15) Peptide Signal:   %s   cut: 35 range:35-328
Sequence
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Send to Peroxiscan
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MHYSFLFVSF CTMATRSVAC ISLLILLCST AIYGQLCPDF YDKSCPNALS IVNSVVKQAV AKEKRMGASL VRLHFHDCFV NGCDASVLLD DTPTFTGEKT ANPNNNSLRG FHVIDAIKTQ  VEADCSGVVS CADIVAIAAR DSVVQLGGPT WTVLLGRRDS TTASLTAANN LIPPPTSNLS ALISSFRAQG LSADDMVALS GSHTIGKARC TSFKNRIYNE SNIDSSFASL RKANCPSTGG 
DNNLAPLDLL TPTVFDNNYY NNLKGQKGLL HSDQQLFNGG SADTKVSFYA TNPNAFFNDF AAAMVKMGNI KPLTGNNGEI RKNCRKIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction (5' is missing).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATTTTTATGA CAAATCGTGC CCCAATGCCT TGTCCATAGT GAATTCTGTA GTAAAGCAGG CCGTAGCCAA GGAGAAAAGA ATGGGGGCGT CGTTGGTCCG CCTTCACTTT CACGACTGTT  TCGTTAACGT AATGCTTTGT TTAACTCCAC TGTATCGTCT CAATTTTTAA ATGATATGTT GCGTGTTCGA GATGTTTTCT GCCTTCATTT TTTATCCCAT GTATTGTTGT AATCAAATCA  CTTGACCTAA TTGTACCCTT AACTGGCTTT CCTGTGGCGG TTAGGGTTGC GATGCCTCGG TACTGTTGGA CGACACCCCG ACATTTACAG GAGAAAAGAC TGCAAATCCG AATAACAATT  CCTTGAGAGG ATTCCATGTT ATAGACGCCA TCAAAACTCA AGTTGAGGCA GACTGCAGTG GGGTCGTGTC GTGTGCCGAC ATTGTCGCTA TTGCTGCTCG TGATTCAGTC GTGCAAGTAT  AAATTTTTCT CTTCACTTCT GAATTTATTG AACTATTGGT AAATACAATA TCTCATCTCT GAGAAATTTG AATCGAATAA CGTTGTTGGT TCTTCTTTAT TTGATAGCTG GGAGGCCCAA  CATGGACGGT ATTGCTAGGA AGGCGAGACT CGACGACTGC TAGTTTAACC GCTGCAAACA ATCTCATTCC GCCCCCCACT TCCAACCTCA GCGCCCTCAT CTCATCATTT AGAGCACAAG  GGCTTTCTGC CGACGACATG GTCGCACTTT CAGGTATGCA GGATTAAATC GATTTCAGAG CCATTACGGT CTTCGAATTT GTAACAACTA GTCATCAGAT ATCATACCTC ATTAAATTCG  TACTGTTGCA GGTTCTCATA CGATTGGTAA AGCGCGTTGC ACCAGCTTCA AAAATCGCAT CTATAACGAA TCCAACATAG ATTCGTCATT TGCCAGCTTA CGCAAGGCAA ACTGCCCAAG  CACAGGAGGC GACAATAATC TCGCACCCTT GGACCTCCTC ACTCCCACTG TCTTCGACAA TAACTATTAT AACAATCTGA AAGGCCAGAA AGGACTCCTC CACTCTGATC AACAACTATT  CAACGGGGGC TCTGCTGATA CTAAGGTTTC TTTCTACGCC ACCAATCCAA ACGCCTTCTT CAATGATTTT GCAGCTGCCA TGGTGAAGAT GGGGAACATC AAACCTCTTA CCGGGAACAA 
TGGAGAGATC CGAAAAAATT GCAGAAAAAT CAACTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCACTATT CATTTCTCTT TGTTTCATTT TGCACTATGG CAACCAGAAG CGTTGCATGT ATTAGTTTGC TAATTCTTCT GTGTTCGACT GCCATTTATG GGCAACTTTG CCCAGATTTT  TATGACAAAT CGTGCCCCAA TGCCTTGTCC ATAGTGAATT CTGTAGTAAA GCAGGCCGTA GCCAAGGAGA AAAGAATGGG GGCGTCGTTG GTCCGCCTTC ACTTTCACGA CTGTTTCGTT  AACGGTTGCG ATGCCTCGGT ACTGTTGGAC GACACCCCGA CATTTACAGG AGAAAAGACT GCAAATCCGA ATAACAATTC CTTGAGAGGA TTCCATGTTA TAGACGCCAT CAAAACTCAA  GTTGAGGCAG ACTGCAGTGG GGTCGTGTCG TGTGCCGACA TTGTCGCTAT TGCTGCTCGT GATTCAGTCG TGCAACTGGG AGGCCCAACA TGGACGGTAT TGCTAGGAAG GCGAGACTCG  ACGACTGCTA GTTTAACCGC TGCAAACAAT CTCATTCCGC CCCCCACTTC CAACCTCAGC GCCCTCATCT CATCATTTAG AGCACAAGGG CTTTCTGCCG ACGACATGGT CGCACTTTCA  GGTTCTCATA CGATTGGTAA AGCGCGTTGC ACCAGCTTCA AAAATCGCAT CTATAACGAA TCCAACATAG ATTCGTCATT TGCCAGCTTA CGCAAGGCAA ACTGCCCAAG CACAGGAGGC  GACAATAATC TCGCACCCTT GGACCTCCTC ACTCCCACTG TCTTCGACAA TAACTATTAT AACAATCTGA AAGGCCAGAA AGGACTCCTC CACTCTGATC AACAACTATT CAACGGGGGC  TCTGCTGATA CTAAGGTTTC TTTCTACGCC ACCAATCCAA ACGCCTTCTT CAATGATTTT GCAGCTGCCA TGGTGAAGAT GGGGAACATC AAACCTCTTA CCGGGAACAA TGGAGAGATC 
CGAAAAAATT GCAGAAAAAT CAACTGA 

Retrieve as FASTA