Entry information : PtaPrx90(PTA00077215 / PTA00015499/ PTA00083173)
Entry ID 12740
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2021-01-18 (Christophe Dunand)
Peroxidase information: PtaPrx90(PTA00077215 / PTA00015499/ PTA00083173)
Name PtaPrx90(PTA00077215 / PTA00015499/ PTA00083173)
Class Class III peroxidase     [Orthogroup: Prx148]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx90
start..stop
S start..stop
PtaPrx92 456 2e-164 1..223 118..340
PabPrx74 405 1e-144 1..223 112..333
PabPrx159 405 2e-144 1..223 118..339
PabPrx212 402 4e-143 1..223 118..339
Literature and cross-references PtaPrx90(PTA00077215 / PTA00015499/ PTA00083173)
Protein sequence: PtaPrx90(PTA00077215 / PTA00015499/ PTA00083173)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   223
PWM (Da):   %s   24432.36  
PI (pH):   %s   9.24
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AKSILEDKCP NVVSCADILA FAARDSAHQA GGLIWEVPAG RRDGRISRAS DIPGNLPAPQ FDVNQLTQNF AAKFLSVEDM VTLSGAHSIG VSHCSSFSAN RLYNFSGTGH EDPSMDPRFA 
LSLKAKCPIP TSNSHSDPTV YLDSLTPRRL DEKYYLDLQV KRGVLTSDQT LMSSPSTARM VKINSKYPSI WRKKFGRAMV KMGEIDVLTG SQGEIRKNCR IVN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction, exon 1 and start of exon 2 are missing.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCAAAGTCTA TTCTGGAGGA CAAATGCCCG AACGTGGTCT CATGCGCTGA CATCCTTGCC TTTGCTGCAA GAGATAGTGC CCACCAAGTA ATTAACCTAC CCATACCCTC GATTTCTCGC  TCTGTGATAT TGTAACTATA TCTTTATATT CATATTTCCG TATATTGGCT GGCGCAGGCT GGCGGATTAA TTTGGGAAGT GCCCGCGGGA CGAAGGGACG GAAGGATTTC TCGAGCATCA  GACATCCCAG GGAATCTGCC TGCTCCACAA TTCGATGTTA ACCAACTCAC ACAAAATTTC GCTGCAAAAT TTTTGTCAGT GGAAGACATG GTCACTCTCT CAGGTAGCCA CTGGTACTGA  TTAACAATAA TCCAAATATA TATTTGCTTC AACTGAACGT ATGATATCCC ATCGTCAATC GTATTTTTAA CATAAGTTGA TATATTTTCA GGGGCGCACT CTATCGGGGT TTCTCATTGC  TCTTCATTCA GCGCAAACAG GCTTTACAAT TTCAGTGGAA CAGGTCATGA GGACCCCAGT ATGGATCCTC GATTCGCTTT GTCACTGAAA GCCAAATGCC CAATCCCTAC TTCTAATTCA  CACTCTGATC CAACCGTGTA TTTGGATTCA TTGACACCCA GACGATTAGA TGAGAAATAT TACTTGGATC TTCAAGTAAA ACGTGGAGTG TTGACCTCTG ATCAGACGTT GATGTCGAGT  CCATCGACAG CCAGAATGGT GAAGATCAAC TCCAAATACC CGTCCATTTG GAGGAAGAAA TTTGGAAGGG CAATGGTGAA GATGGGTGAA ATAGATGTGT TGACAGGGTC GCAGGGGGAG 
ATCAGGAAAA ATTGCCGGAT TGTCAACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCAAAGTCTA TTCTGGAGGA CAAATGCCCG AACGTGGTCT CATGCGCTGA CATCCTTGCC TTTGCTGCAA GAGATAGTGC CCACCAAGCT GGCGGATTAA TTTGGGAAGT GCCCGCGGGA  CGAAGGGACG GAAGGATTTC TCGAGCATCA GACATCCCAG GGAATCTGCC TGCTCCACAA TTCGATGTTA ACCAACTCAC ACAAAATTTC GCTGCAAAAT TTTTGTCAGT GGAAGACATG  GTCACTCTCT CAGGGGCGCA CTCTATCGGG GTTTCTCATT GCTCTTCATT CAGCGCAAAC AGGCTTTACA ATTTCAGTGG AACAGGTCAT GAGGACCCCA GTATGGATCC TCGATTCGCT  TTGTCACTGA AAGCCAAATG CCCAATCCCT ACTTCTAATT CACACTCTGA TCCAACCGTG TATTTGGATT CATTGACACC CAGACGATTA GATGAGAAAT ATTACTTGGA TCTTCAAGTA  AAACGTGGAG TGTTGACCTC TGATCAGACG TTGATGTCGA GTCCATCGAC AGCCAGAATG GTGAAGATCA ACTCCAAATA CCCGTCCATT TGGAGGAAGA AATTTGGAAG GGCAATGGTG 
AAGATGGGTG AAATAGATGT GTTGACAGGG TCGCAGGGGG AGATCAGGAA AAATTGCCGG ATTGTCAACT AA 

Retrieve as FASTA