Entry information : PabPrx218 (MA_9087g0010)
Entry ID 12742
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2017-06-08 (Justine Latour)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-06-08 (Justine Latour)
Peroxidase information: PabPrx218 (MA_9087g0010)
Name (synonym) PabPrx218 (MA_9087g0010)
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx218
start..stop
S start..stop
PabPrx120 491 3e-177 1..323 1..279
PabPrx92 476 7e-171 13..326 17..331
PtaPrx56 428 2e-152 10..291 2..285
PabPrx108 416 3e-147 28..324 28..323
Literature and cross-references PabPrx218 (MA_9087g0010)
Protein sequence: PabPrx218 (MA_9087g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (300)
PWM (Da):   %s   35359 (32527.5) Transmb domain:   %s   i5-24o (i5-24o)
PI (pH):   %s   7.45 (7.76) Peptide Signal:   %s   cut: 28 range:28-327
Sequence
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Send to Peroxiscan
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MTSNVFVANI VVLLGVALLS SLTWCEAGNL RHDFYKRSCP SAESTVEKVV GKYIEKDITL AAPLLRLHFH DCFVRGCDGS ILLNSTQNNV AEKDAIPNLS LRGYEVIDDA KAELEKICPG  VVSCADILSI VARDAVVAGK GPFWRVKTGR RDGRISIASE ALSNLPSPFF NFAQLKASFA HKGLSVKDLV VLSGGHTIGI GHCNLFSNRL YNFTGKGDMD PSLDKSYADE LKTKCKSLAD 
STTIVGMDPG SAVTFDSHYF SNLKSHRGLF QSDAALLTDS ISKKIVEKQL KENSFFDNFK NSMQQMGEIG VLTGSAGEIR EQCASVK 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAAGTA ACGTATTTGT TGCAAATATT GTTGTTCTGT TGGGAGTTGC TCTATTATCT TCACTGACAT GGTGTGAGGC TGGAAATCTG AGGCATGATT TCTACAAAAG GAGTTGCCCA  TCGGCCGAGA GCACCGTTGA AAAAGTAGTA GGGAAATACA TAGAGAAAGA TATAACTCTG GCGGCTCCTC TTCTGAGACT GCACTTTCAC GATTGCTTTG TGAGGGTATG TCTGTCTGAA  TTTATGCGTT CATCAATCAT ATTTGTTGGT AATGACAATT TACTGAATTC AATACTGCAT GTTACTGCAG GGTTGCGATG GATCGATTCT GTTAAACTCT ACGCAAAATA ACGTGGCAGA  AAAAGATGCA ATCCCCAATC TCTCCCTTCG TGGGTATGAA GTTATAGACG ATGCGAAGGC TGAATTAGAG AAAATATGTC CAGGAGTTGT GTCTTGTGCT GACATCCTCT CAATTGTTGC  TCGAGATGCT GTTGTTGCGG CGGTACTATA TATTTTCTCA TCTATAACTA TGTGCCCATT CCTTCGTGTC TGTCTTCATG CTTTTAAGAT CAGAATTTTG ATGGTCTGTA ATTTCAGGGT  CTTAAAGTAT TTGTATTCGC AACAGGATGC AAAGTAATTA CATGGCTGTT GACAATATGT ATGCAGGGTA AAGGACCGTT CTGGCGAGTG AAAACAGGTC GCAGGGACGG AAGGATATCA  ATTGCAAGCG AGGCTTTGAG CAACCTCCCT TCGCCTTTTT TTAACTTCGC CCAGCTTAAA GCCTCTTTTG CTCACAAAGG ACTCAGCGTT AAAGACTTAG TTGTTCTATC TGGTAGGTTT  AAAACTAATT ATATTTTTAC TATTGTGAAT TAACTCTTCA CTCTATCTAG GAATTCTGCT ACTATGTCTA ATAAATTTGG TCTTGATCGC GTATTGCTGC AGGTGGGCAT ACTATCGGAA  TCGGGCACTG CAATTTGTTC AGCAACCGAC TCTACAACTT CACAGGGAAA GGGGACATGG ATCCTTCCCT GGACAAGTCC TACGCAGACG AGCTGAAGAC AAAGTGCAAA AGCTTAGCGG  ACAGTACAAC CATAGTGGGA ATGGATCCTG GGAGCGCCGT CACCTTCGAC AGCCATTATT TCAGTAATCT AAAATCGCAC AGAGGGCTCT TCCAATCAGA TGCCGCGCTT CTCACCGATT  CCATTTCAAA AAAAATTGTT GAGAAGCAGT TGAAAGAAAA CAGCTTTTTT GACAATTTCA AAAACTCAAT GCAGCAGATG GGAGAAATCG GAGTGCTCAC TGGGAGTGCC GGGGAAATCA 
GAGAGCAGTG CGCCTCTGTA AAATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAAGTA ACGTATTTGT TGCAAATATT GTTGTTCTGT TGGGAGTTGC TCTATTATCT TCACTGACAT GGTGTGAGGC TGGAAATCTG AGGCATGATT TCTACAAAAG GAGTTGCCCA  TCGGCCGAGA GCACCGTTGA AAAAGTAGTA GGGAAATACA TAGAGAAAGA TATAACTCTG GCGGCTCCTC TTCTGAGACT GCACTTTCAC GATTGCTTTG TGAGGGGTTG CGATGGATCG  ATTCTGTTAA ACTCTACGCA AAATAACGTG GCAGAAAAAG ATGCAATCCC CAATCTCTCC CTTCGTGGGT ATGAAGTTAT AGACGATGCG AAGGCTGAAT TAGAGAAAAT ATGTCCAGGA  GTTGTGTCTT GTGCTGACAT CCTCTCAATT GTTGCTCGAG ATGCTGTTGT TGCGGGTAAA GGACCGTTCT GGCGAGTGAA AACAGGTCGC AGGGACGGAA GGATATCAAT TGCAAGCGAG  GCTTTGAGCA ACCTCCCTTC GCCTTTTTTT AACTTCGCCC AGCTTAAAGC CTCTTTTGCT CACAAAGGAC TCAGCGTTAA AGACTTAGTT GTTCTATCTG GTGGGCATAC TATCGGAATC  GGGCACTGCA ATTTGTTCAG CAACCGACTC TACAACTTCA CAGGGAAAGG GGACATGGAT CCTTCCCTGG ACAAGTCCTA CGCAGACGAG CTGAAGACAA AGTGCAAAAG CTTAGCGGAC  AGTACAACCA TAGTGGGAAT GGATCCTGGG AGCGCCGTCA CCTTCGACAG CCATTATTTC AGTAATCTAA AATCGCACAG AGGGCTCTTC CAATCAGATG CCGCGCTTCT CACCGATTCC  ATTTCAAAAA AAATTGTTGA GAAGCAGTTG AAAGAAAACA GCTTTTTTGA CAATTTCAAA AACTCAATGC AGCAGATGGG AGAAATCGGA GTGCTCACTG GGAGTGCCGG GGAAATCAGA 
GAGCAGTGCG CCTCTGTAAA ATGA 

Retrieve as FASTA