Entry information : PabPrx223 (MA_91956g0010)
Entry ID 12747
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2017-06-07 (Catherine Mathe)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2017-06-07 (Catherine Mathe)
Peroxidase information: PabPrx223 (MA_91956g0010)
Name (synonym) PabPrx223 (MA_91956g0010)
Class Class III peroxidase     [Orthogroup: Prx037]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx223
start..stop
S start..stop
PtaPrx40 305 2e-105 1..181 146..326
GbPrx09 249 6e-84 2..175 143..316
PabPrx57 240 2e-82 1..175 1..177
PabPrx184 241 1e-80 1..175 137..311
Literature and cross-references PabPrx223 (MA_91956g0010)
Protein sequence: PabPrx223 (MA_91956g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   194
PWM (Da):   %s   21585.79  
PI (pH):   %s   9.63
Sequence
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Send to Peroxiscan
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MLGRRDSRTA SLSVANSDIP SPASDLANLT SKFRDQGLSQ PEMVAVSGAH TIGKARCTVF RNHIYNDSNI DTAYAKSLQD KCPTSGGDNK LSPLDYKTPT KFDNCYYRNL VAKKGLLHSD 
QELFNGVSTD SQVTQYRNNL KLFERDFAAA IVKMGNIMPL TGSRGEIREK CRKRNSDSSI FHMQRESQRQ EIII 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction (5' is missing, not found in the upstream sequence).
DNA
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ATGCTTGGAA GAAGAGACTC CAGGACTGCA AGTCTAAGCG TTGCCAACAG CGACATTCCC TCTCCTGCTT CCGACCTCGC CAATCTGACC TCCAAATTTC GAGATCAGGG ACTTTCTCAA  CCGGAAATGG TGGCAGTTTC AGGTAACCAA CGCGACTTTA AGCTCCATCC ACTTCTGACT TGCCTTCTAA AACTGTTTTA TTGTTATTTT AGGTGCTCAC ACCATCGGTA AAGCGCGGTG  CACGGTCTTC AGAAATCATA TTTATAACGA TTCGAACATA GACACAGCGT ATGCTAAGTC TTTACAAGAC AAGTGCCCCA CGAGTGGAGG CGACAACAAA TTGTCACCTC TTGATTACAA  AACGCCTACA AAGTTTGACA ACTGTTACTA CAGAAATCTG GTGGCGAAGA AAGGACTTCT CCACTCCGAT CAAGAGCTTT TCAATGGAGT GTCTACTGAT TCTCAGGTTA CCCAGTACAG  AAACAACTTG AAACTTTTCG AGAGAGACTT CGCTGCTGCA ATTGTCAAGA TGGGAAATAT CATGCCTCTC ACGGGTTCCC GAGGAGAGAT CCGGGAGAAA TGCAGAAAAC GGAACTCAGA 
TAGTTCCATC TTTCATATGC AGCGCGAATC TCAGAGACAA GAGATCATTA TTTGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTTGGAA GAAGAGACTC CAGGACTGCA AGTCTAAGCG TTGCCAACAG CGACATTCCC TCTCCTGCTT CCGACCTCGC CAATCTGACC TCCAAATTTC GAGATCAGGG ACTTTCTCAA  CCGGAAATGG TGGCAGTTTC AGGTGCTCAC ACCATCGGTA AAGCGCGGTG CACGGTCTTC AGAAATCATA TTTATAACGA TTCGAACATA GACACAGCGT ATGCTAAGTC TTTACAAGAC  AAGTGCCCCA CGAGTGGAGG CGACAACAAA TTGTCACCTC TTGATTACAA AACGCCTACA AAGTTTGACA ACTGTTACTA CAGAAATCTG GTGGCGAAGA AAGGACTTCT CCACTCCGAT  CAAGAGCTTT TCAATGGAGT GTCTACTGAT TCTCAGGTTA CCCAGTACAG AAACAACTTG AAACTTTTCG AGAGAGACTT CGCTGCTGCA ATTGTCAAGA TGGGAAATAT CATGCCTCTC 
ACGGGTTCCC GAGGAGAGAT CCGGGAGAAA TGCAGAAAAC GGAACTCAGA TAGTTCCATC TTTCATATGC AGCGCGAATC TCAGAGACAA GAGATCATTA TTTGA 

Retrieve as FASTA