Entry information : PabPrx238
Entry ID 12757
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2017-06-09 (Justine Latour)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-06-09 (Justine Latour)
Peroxidase information: PabPrx238
Name PabPrx238
Class Class III peroxidase    [Orthogroup: Prx262]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx238
start..stop
S start..stop
PtaPrx22 509 0 10..333 1..324
PgPrx06 449 3e-160 2..332 3..333
PabPrx93 449 3e-160 2..332 3..333
PabPrx109 449 4e-160 1..332 2..333
Literature and cross-references PabPrx238
Protein sequence: PabPrx238
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (303)
PWM (Da):   %s   35720.44 (32331.8) Transmb domain:   %s   i9-28o (i9-28o)
PI (pH):   %s   4.37 (4.13) Peptide Signal:   %s   cut: 31 range:31-333
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASRNMRAAM YWAFSVISLL MGLYFGHGRA QLSESFYAQT CPNLESIVTQ AVTAKFQETF VTGPATLRLF FHDCFVQGCD ASVLIDSTST NTAEKDASEN LNLASDGFDT VVRAKAAVEA  VCPSLVSCAD ILALAARDVV GLTGGPSYNV ELGRKDGLIS LASEVSANLP PPTFDLDQLN ALFALNSLSQ TDMIALSGAH TIGISRCNEF SNRLYNFSSS NQVDPTLDPS YAQQLQQTCP 
INASPNIIVS MDPLTPTQFD NLYYQNLQAH EGLFTSDQIL FTDSRSSSTV NDFAASTNSF QTAFVTAMTK LGRTAVKTGS QGEIRLDCSA FNS 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAC GAAATATGAG GGCAGCGATG TATTGGGCTT TTAGTGTTAT ATCGCTACTG ATGGGTCTTT ATTTTGGCCA TGGGAGAGCT CAACTCAGCG AGAGTTTCTA CGCCCAGACG  TGCCCAAATC TGGAATCCAT AGTTACACAA GCTGTCACAG CTAAATTTCA GGAGACTTTT GTGACAGGCC CTGCAACTCT GAGGCTCTTC TTTCATGATT GCTTTGTTCA GGTGAGAAAA  TGGAGTTCAT ATGTATAAAA CACGTGAATT CTTCATGCAT GTGATCTTGA GAATTATTTG ATTGTTTTAT TTTCTTCTCT TTGCAGGGAT GTGATGCATC GGTCCTCATT GACAGTACTT  CGACCAACAC AGCTGAGAAA GATGCCTCTG AGAACTTAAA TCTGGCCTCG GATGGATTTG ACACTGTTGT CAGGGCAAAG GCGGCTGTGG AGGCAGTCTG TCCCAGCCTG GTCTCCTGTG  CAGACATTTT AGCATTGGCT GCGCGAGATG TTGTTGGGCT GGTACGTTTA TTACTAAGGA TCTATATGTA AGAGAATGAA TAAGCATTGG AATTAATACA AGTTGTTGAA TGTTATATTG  ATTTAGTAGA GTATTTTGGC AGACAGGAGG TCCTTCATAT AACGTGGAGT TGGGTCGTAA AGATGGATTG ATATCTCTAG CCTCTGAAGT GTCGGCCAAT TTACCTCCAC CGACCTTCGA  TTTGGACCAG TTGAATGCTC TCTTTGCTTT AAACAGCCTC TCACAAACAG ACATGATTGC TCTTTCAGGT TAAATTTTTG AATTATGAGC ATATTACAGG TTATAAGCAA GTTACAGGTT  ATAAGCAAGT TACAGGTTGA TGAGCATGTA GTTTTCAGTG TTTGGAAACA ATATTGTGAT AAGTTGTATA GTTTGAGTAT GTAGTTTTTC AGTTACAATG TAGAACAAAT TTTTTTTTAG  ATAAAACTGT GTATTGGTTT TTGAAAAGTT GAAATTTTAT TGGTTTTGAG GATGGTAGAA CAAATTTTCT GAATAAAACT GTGTATTGGT GGTTTTGAGG ATGGTAGAAC AAATTTTCTA  GATAAAACTG TGTATTGGTT TAAAACGTTG AAATTTTATT GATCTTGATG ATGGGTGGAG TATCCATTAA AAATTTTATA AATATCAAAA ACTAATACAC ATTTCTATCC AAAAAATTTT  TTCTACAAAT TGTAAAACTT GTAATCTTAA ATAATTTACA TACTAATAAT TTTACATACT AATAATTGGT TTGTCTTGTC TTATTAAGGG GCTCATACTA TAGGTATTTC TCGCTGCAAC  GAGTTTTCAA ACAGGCTTTA TAACTTTTCA TCCTCGAATC AAGTTGATCC CACTCTGGAT CCTTCTTATG CCCAGCAACT GCAACAGACA TGTCCAATCA ATGCGAGTCC TAATATCATA  GTGTCCATGG ATCCATTAAC TCCCACACAA TTTGATAATC TTTACTATCA GAATCTACAA GCTCATGAAG GGCTATTCAC TTCCGATCAA ATCCTGTTCA CTGACTCTCG TTCTTCAAGT  ACTGTGAATG ACTTTGCAGC GAGCACGAAT TCTTTTCAAA CTGCTTTTGT TACTGCCATG ACAAAGCTTG GTCGAACAGC AGTTAAGACA GGCAGCCAAG GCGAAATAAG ACTAGATTGC 
AGTGCCTTCA ATTCATAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAC GAAATATGAG GGCAGCGATG TATTGGGCTT TTAGTGTTAT ATCGCTACTG ATGGGTCTTT ATTTTGGCCA TGGGAGAGCT CAACTCAGCG AGAGTTTCTA CGCCCAGACG  TGCCCAAATC TGGAATCCAT AGTTACACAA GCTGTCACAG CTAAATTTCA GGAGACTTTT GTGACAGGCC CTGCAACTCT GAGGCTCTTC TTTCATGATT GCTTTGTTCA GGGATGTGAT  GCATCGGTCC TCATTGACAG TACTTCGACC AACACAGCTG AGAAAGATGC CTCTGAGAAC TTAAATCTGG CCTCGGATGG ATTTGACACT GTTGTCAGGG CAAAGGCGGC TGTGGAGGCA  GTCTGTCCCA GCCTGGTCTC CTGTGCAGAC ATTTTAGCAT TGGCTGCGCG AGATGTTGTT GGGCTGACAG GAGGTCCTTC ATATAACGTG GAGTTGGGTC GTAAAGATGG ATTGATATCT  CTAGCCTCTG AAGTGTCGGC CAATTTACCT CCACCGACCT TCGATTTGGA CCAGTTGAAT GCTCTCTTTG CTTTAAACAG CCTCTCACAA ACAGACATGA TTGCTCTTTC AGGGGCTCAT  ACTATAGGTA TTTCTCGCTG CAACGAGTTT TCAAACAGGC TTTATAACTT TTCATCCTCG AATCAAGTTG ATCCCACTCT GGATCCTTCT TATGCCCAGC AACTGCAACA GACATGTCCA  ATCAATGCGA GTCCTAATAT CATAGTGTCC ATGGATCCAT TAACTCCCAC ACAATTTGAT AATCTTTACT ATCAGAATCT ACAAGCTCAT GAAGGGCTAT TCACTTCCGA TCAAATCCTG  TTCACTGACT CTCGTTCTTC AAGTACTGTG AATGACTTTG CAGCGAGCAC GAATTCTTTT CAAACTGCTT TTGTTACTGC CATGACAAAG CTTGGTCGAA CAGCAGTTAA GACAGGCAGC 
CAAGGCGAAA TAAGACTAGA TTGCAGTGCC TTCAATTCAT AG 

Retrieve as FASTA