Entry information : PabPrx30 (MA_10259419g0010)
Entry ID 12766
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2018-01-16 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-16 (Christophe Dunand)
Peroxidase information: PabPrx30 (MA_10259419g0010)
Name (synonym) PabPrx30 (MA_10259419g0010)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx30
start..stop
S start..stop
PabPrx150 520 0 1..257 3..259
PabPrx51 432 7e-156 1..234 12..245
PabPrx183 405 7e-145 1..256 12..271
PtaPrx19 399 2e-141 1..257 81..341
Literature and cross-references PabPrx30 (MA_10259419g0010)
Protein sequence: PabPrx30 (MA_10259419g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   257
PWM (Da):   %s   28094.71  
PI (pH):   %s   5.58
Sequence
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Send to Peroxiscan
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DGSVLIDSTA KNTAEKDSPA NNPSLHGFDV IDRAKSRLET ICPNTVSCAD ILAFAARDSA KLASPYEFSW DVPAGRRDGI ISLSSDIPSN LPPPTFDVNQ LTQRFASKGL SQEEMVILSG  AHSFGISRCS SFLKRLYNFS NTFQTDPSLD PQYAQLLKQK CPQGSNGDPT VFMDTITPET LDNFYYDGLN MNHGLFTSDA TLLTNPNTRN LVHANCGHDN LRRWQISFAA AMVKMGMIIE 
LTGNQGEICH NCRVINS 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Partial sequence from genomic. 5'end (exon 1) is missing due to scaffold border.
DNA
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GATGGGTCTG TTCTGATAGA CTCCACCGCC AAAAACACAG CAGAGAAAGA TAGCCCAGCT AACAATCCCA GTCTTCACGG ATTTGACGTA ATCGACAGAG CGAAATCGAG ATTAGAGACC  ATCTGCCCAA ACACTGTTTC TTGTGCTGAT ATCCTCGCAT TTGCTGCTAG AGATAGCGCA AAGCTGGTAA GCACATCGGA GATAATAAAA TGTTGAGAAA TTTATTCAAA ACAGATATAC  ACAACCATTT CTGTCAAATT TGTAACTAAC TCTCTATTTA CATTAACCTT ATATGTAGTG TCAATACTAC TCTACTCATG TTTTAAAGTT TTAAGCCGTT ACTAATTGGA ATTATTTCAT  TGTTTAAATG GCATATTCAA TAATCTCTCT AAACTATTTC AATTTTCATT GTTCAAATGG CATAAATAAC CGAGTTTCTT TTCTTTACAA CTTTCATTTG AAAGTACGAC AAGCGACTTT  GGGGGTTATA TTTTTACAGG GATAGTTCTA TTTACACATT ATTTGATACG ATAGCAAGCG ACAATGTGTA TTCTAATTTA AGTCGAAAAC CTATTTAATT ACTATTATTT ATAACATCAA  GCAATGTTCA ACAGGCAATA ATACTTTTAT AATTGTTTGC AGGCATCGCC ATATGAATTC AGCTGGGATG TTCCTGCTGG AAGAAGGGAT GGAATTATTT CGCTATCTTC AGATATCCCG  TCAAATCTAC CTCCCCCTAC CTTCGATGTA AACCAGCTGA CTCAGAGATT TGCATCCAAA GGTCTATCCC AGGAGGAGAT GGTTATACTC TCAGGTACGT ACTAATGTTT GTGAAGGTAT  TGATGTTGGT ATATGAATGC TTTTGGAGTA AGACACTGTA TTGCAATAAG GTCAGTTACA CTCCAGTAAA ACAGTATATC AGGGATTAAC AGCAGTTCCA ATAGTAAGTA ATAAAATTGT  TATCTGAATG TTCAATCGTT ATGATTGGTA ATGTTTATCC GTGGTAATGT TCATGCAGGA GCACACTCAT TTGGCATCTC TCGCTGCTCT TCATTCTTGA AGAGGCTCTA CAACTTCAGC  AACACTTTTC AGACTGACCC ATCTCTTGAT CCTCAGTATG CTCAGCTACT GAAGCAGAAG TGTCCTCAGG GAAGCAACGG CGACCCGACC GTGTTCATGG ATACTATTAC GCCCGAAACC  CTCGACAATT TTTACTACGA CGGTCTTAAT ATGAATCATG GTTTGTTTAC ATCCGATGCA ACGCTGCTCA CAAATCCAAA CACCAGAAAT TTAGTCCATG CAAACTGCGG GCACGATAAC 
CTGCGCAGGT GGCAGATAAG CTTTGCTGCT GCCATGGTTA AGATGGGAAT GATTATAGAA TTGACTGGCA ACCAGGGAGA AATCTGTCAC AACTGCAGGG TCATCAACAG CTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATGGGTCTG TTCTGATAGA CTCCACCGCC AAAAACACAG CAGAGAAAGA TAGCCCAGCT AACAATCCCA GTCTTCACGG ATTTGACGTA ATCGACAGAG CGAAATCGAG ATTAGAGACC  ATCTGCCCAA ACACTGTTTC TTGTGCTGAT ATCCTCGCAT TTGCTGCTAG AGATAGCGCA AAGCTGGCAT CGCCATATGA ATTCAGCTGG GATGTTCCTG CTGGAAGAAG GGATGGAATT  ATTTCGCTAT CTTCAGATAT CCCGTCAAAT CTACCTCCCC CTACCTTCGA TGTAAACCAG CTGACTCAGA GATTTGCATC CAAAGGTCTA TCCCAGGAGG AGATGGTTAT ACTCTCAGGA  GCACACTCAT TTGGCATCTC TCGCTGCTCT TCATTCTTGA AGAGGCTCTA CAACTTCAGC AACACTTTTC AGACTGACCC ATCTCTTGAT CCTCAGTATG CTCAGCTACT GAAGCAGAAG  TGTCCTCAGG GAAGCAACGG CGACCCGACC GTGTTCATGG ATACTATTAC GCCCGAAACC CTCGACAATT TTTACTACGA CGGTCTTAAT ATGAATCATG GTTTGTTTAC ATCCGATGCA  ACGCTGCTCA CAAATCCAAA CACCAGAAAT TTAGTCCATG CAAACTGCGG GCACGATAAC CTGCGCAGGT GGCAGATAAG CTTTGCTGCT GCCATGGTTA AGATGGGAAT GATTATAGAA 
TTGACTGGCA ACCAGGGAGA AATCTGTCAC AACTGCAGGG TCATCAACAG CTAA 

Retrieve as FASTA