Entry information : PabPrx51 (MA_10428759g0010)
Entry ID 12786
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2018-01-16 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-16 (Christophe Dunand)
Peroxidase information: PabPrx51 (MA_10428759g0010)
Name (synonym) PabPrx51 (MA_10428759g0010)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx51
start..stop
S start..stop
PabPrx150 441 2e-159 10..245 1..236
PabPrx30 432 6e-156 12..245 1..234
PabPrx183 374 9e-133 1..245 1..249
PtaPrx19 373 3e-131 1..244 70..317
Literature and cross-references PabPrx51 (MA_10428759g0010)
Protein sequence: PabPrx51 (MA_10428759g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   245
PWM (Da):   %s   27502.35  
PI (pH):   %s   6.07
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHFHDFFIRG CDGSVLIDST AKNTTEKDSP TNNPSLHRFD VIDRVKSRLE TICPNTVSCA DILTFAARDN AKLASPYEFN WDVPSRRRDG IISLSSDILS NLPPPTFDVN QLTQRFASKG  LSQEEMVILS GAHSFGISHC SSFLNRLYNF NNTFQIDPYL DPQYAQLLKQ KCPQGSNDDS TVFMDNFTLE TLNNFYYDGL NMNHGLFTSD ATLLTNPNTG NLVHANCGHY NLRRWQISFV 
AAMVK 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Exon 1 is missing. Same sequence is found downstrean as well as 2 identical part of RBOH sequence is found near downstream!!!!
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCATTTCC ACGATTTCTT CATCCGGGGA TGCGATGGGT CTGTTCTGAT AGACTCCACT GCCAAAAACA CAACAGAGAA AGATAGCCCA ACTAACAATC CCAGTCTTCA TAGATTTGAC  GTAATCGACA GAGTGAAATC GAGATTAGAG ACCATCTGCC CAAACACTGT TTCTTGCGCT GATATCCTCA CATTTGCTGC TAGAGATAAC GCAAAGCTGG CATCGCCATA TGAATTCAAC  TGGGATGTTC CTTCTAGAAG AAGGGATGGA ATTATTTCGC TATCTTCAGA TATCCTGTCA AATCTACCTC CCCCTACCTT CGATGTAAAC CAGTTGACTC AGAGATTTGC ATCCAAAGGT  CTATCCCAGG AGGAGATGGT TATACTCTCA GGAGCACACT CATTTGGCAT CTCTCACTGC TCTTCATTCT TGAACAGGCT CTACAACTTC AACAACACTT TTCAGATTGA CCCATATCTT  GATCCTCAGT ATGCTCAGCT ACTGAAGCAG AAGTGCCCTC AGGGAAGCAA CGACGACTCG ACCGTGTTCA TGGATAATTT TACACTTGAA ACCCTCAATA ATTTTTACTA CGATGGTCTT  AATATGAATC ATGGTTTATT TACCTCCGAT GCAACGCTGC TCACAAATCC AAACACCGGA AATTTAGTCC ATGCAAACTG CGGGCACTAT AACTTGCGCA GGTGGCAGAT AAGCTTTGTT 
GCTGCCATGG TTAAG 

Retrieve as FASTA