Entry information : PabPrx52(PAB00008545 / MA_10429012g0010)
Entry ID 12787
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-19 (Christophe Dunand)
Peroxidase information: PabPrx52(PAB00008545 / MA_10429012g0010)
Name PabPrx52(PAB00008545 / MA_10429012g0010)
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx52
start..stop
S start..stop
PgPrx32 596 0 4..318 1..314
PabPrx300 572 0 4..318 1..311
PtaPrx40 548 0 1..318 4..320
PabPrx188 541 0 1..318 4..325
Literature and cross-references PabPrx52(PAB00008545 / MA_10429012g0010)
Protein sequence: PabPrx52(PAB00008545 / MA_10429012g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318
PWM (Da):   %s   34817.81  
PI (pH):   %s   9.88
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAMRIAITW VCCLILFLTC AYGNLSPSFY DKTCPQALSI VKSTVIQAIS KEPRIGASLL RLHFHDCFVN QGCDGSLLLD DTSTFTGEKT ANPNNHSARG FGVVDKIKKK LEKACSGVVS  CADILTIAAR DSVVTLGGPT WNVLLGRRDS RTANLTAANN NIPAPTSNLA NLTSKFRAQG LSKREMVVLS GGHTIGKARC TSFRDHIYND SNIDTTYAKS LQAKCPTSGG DNRLSPLDYQ 
TPTKFENNYY KNLVARKGLL HSDQELFNGV STDSLVTKYN KNLKLFERDF VAAMIKMGNI MPLTGSQGQI RKNCRKRN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction (contains 2 ORF and exons 1 and 2 + end of last exon are missing, scaffold border and NN between the ORFs).. Completed with WGS from NCBI CBVK0102275012.1 and CBVK0107445575.1
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTTTATGCT CAGTCGCGTT TGCAAATTGA AGTTTGTTTT TGGCATGCAG CGAAGGATTA CAGCGAAAAG AATGATCTCT GCTCTCATCT CAAAGGTTTT TTGCATGCAG CGAGTGTGAT  GCTTGGCAGA AGGGACTCCG GCACTGCGAA TCGAACCGCT GCGAACACCA ACATTCCCGC CCCTACTGCC AACCTCGCCA ATCTCACCTC CAAATTTGGA GCTCAGGGAC TTTCTAAACG  GGAAATGGTT GTGCTTTCAG GTAATCCAGA ATGCTTCTAA ACGGGAAATG GTTGTGCTTT CAGGTAATCC AGAATGCCTG CTTATGGCTC TAAATAGTTT CTACACTCAA ATTCTTGGCT  TCTAAATTCA TTTTTGTTAT TTCAGGTGGT CACACCATCG ACAAAGCGCA TTGCACGAGC TTTAGAGATC ATATATACAA CGATTCAAAC ATAGACACGG CCTACGCTAA GTCATTACAG  GACAAGTGCC CCAGAAGTGG AGGGGACAAT AGATTGTCGC CTCTCGATTA CCAAATGTCG ACCAAGTTCG AAAACAATTA CTACAAAAAT CTGGTAGCAA GGAAAGGACT TCTGCATTCT 
GATCAAGAGC TTTTTAATGG AGTATCTACT GATTCTCT 

Retrieve as FASTA