Entry information : PabPrx[P]66
Entry ID 12797
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2015-03-16 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2015-03-16 (Christophe Dunand)
Peroxidase information: PabPrx[P]66
Name PabPrx[P]66
Class Class III peroxidase     [Orthogroup: Prx036]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx[P]66
start..stop
S start..stop
PabPrx67 574 0 1..317 6..327
PabPrx[P]34 511 0 2..309 16..327
PgPrx29 465 1e-166 25..317 41..341
GbPrx34 447 2e-159 25..317 34..331
Literature and cross-references PabPrx[P]66
Protein sequence: PabPrx[P]66
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   314 (297)
PWM (Da):   %s   33948.3 (32209.3)  
PI (pH):   %s   8.4 (8.28) Peptide Signal:   %s   cut: 22 range:18-314
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVPLLIIVSI CIRSGSGRVD ALTVLSKDYY KQTCPSAKTV IRDTIRNATQ FDPKIPVRIL QMHFHDCG*D ASVLLDSTPS DQAEKDAPPN VSL*AFYVLD DAKTKLESIC PQTVSCADIL  AIVATxxGGP SWDVLKG*KD GPISRANDTR NLPAPTFNVS QLIQSFSLRG LSVRDLVALS GGRTLGFSHC SSFESRLHNF NATLKLKVDP TMEPQFAQSL RTVCPRANNN RSAGVFLDST 
ANQFDNAYFK HLMEGKGVFG SNQALFLENP TNMIVERFAR DENAFFKAFE TSMVKLGSIG VVTSGGEVRL NCRKVNS 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. Incorrect prediction (frame shift and stop in frame).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGCCGT TGCTGATAAT CGTTTCCATC TGCATCAGAT CAGGATCTGG TCGGGTCGAT GCTTTGACTG TTCTGAGCAA GGATTACTAC AAGCAAACGT GCCCAAGTGC AAAGACTGTG  ATAAGGGATA CCATACGCAA CGCCACCCAG TTCGACCCTA AAATCCCTGT TCGCATTCTA CAAATGCACT TCCATGACTG CTTCATTCGG GTATTTGAAT TATATTTTGA TATCATAGTT  AACCGGCATA GGTTCATATC TCCCAGCTGA ATCCAAAAGT TTTCAATGTT TTTAATCACA TTTCCCAGCT GAATCCAAAA GTTTTCAATG TGTTTAATCA CATTTAGCTC AGGCTTCGCT  CCCACTAGCA TTTCATCGAA TTCCTGATTA CTGTAGAGCT TGTAGGTATA AAAATCTTGT CAGTTGCACA TTTATCGGAT TAGAGTAGAA TAGAATATGG ATTTTTTGTT AAAATATATA  ATTTAGAGGG TTTGTATAAG TCTGGACACT AAAGACATGA TGCTAATTTG ATAACATAGT TAACTCGTAT AAATTCATTG ACTTCGGGCA GAATGATAAA ATTATCCATG TTTGTAATCT  ATTTGGACCA TCAACGTTTT GTAATCTATT TGGACCGTTA ACACATCGAC AAATGGAAGA TTAATATGAA TGCATGTTAG TTGATTTATA GTTTTTTTAA ACCAAAATGG CTACGGTTGG  GTATCGACAT TGGCCTTGGC GTAAATGAGT GCAGGGGTGA GATGCATCGG TGCTGTTAGA CTCCACTCCA AGCGATCAAG CAGAGAAAGA CGCGCCACCC AACGTCTCAC TCTGAGCCTT  CTACGTTTTA GATGATGCCA AGACGAAGCT TGAGTCCATT TGCCCACAAA CTGTTTCCTG CGCTGACATT CTTGCAATCG TTGCATGTTG TAGTTATGGT ATAATATCCT CCCAATAGTT  GTGATAATAG GTTAGACATG TACGTATGCT TAATTGAATT ATTGATTTGG CAGACAGGGG GTCCAAGCTG GGACGTTCTC AAAGGGTGAA AGGATGGACC CATCTCCAGA GCAAATGATA  CAAGGAATTT GCCAGCCCCC ACCTTCAACG TTTCTCAGCT CATTCAAAGC TTTTCCCTAC GTGGACTATC TGTCCGTGAT CTTGTCGCAT TGTCCGGTAC TTAGAGCCCT CTCTTCTATT  TATACTCCTC AATTCTAATC TTAATTGTCC AAGTTGAGCT TCATAAATTG GAGATAAAAA CAAATCCAGT AGTATGTTTT TCTAAATGTA TATATTCGAT AGATGAGACG CGTGTGCCTT  TCAACTCAAA TATGATCGAC ATCTACATTT CACAATTTTT GTAATCTGTT TTGGAAAGTC AACAGATCCA AAATGAAATG ATGAAAGTAT GGTAGCCCTA CATTGTAACT TCTATCTCTA  ATGGAATTTT AATTGAGTTA TGAATTGGCA TTAACAGGTG GGCGTACATT GGGCTTCTCT CACTGCTCTT CCTTTGAGAG CAGACTTCAT AACTTCAACG CTACACTTAA AAGTGGATCC  AACCATGGAG CCACAGTTTG CACAGAGCTT ACGCACGGTG TGCCCTAGGG CTAACAACAA TCGCAGCGCA GGGGTTTTTT TGGACTCCAC TGCGAACCAG TTTGACAACG CATACTTCAA  ACATTTGATG GAAGGAAAGG GAGTGTTTGG CTCCAACCAG GCATTGTTTT TGGAGAACCC AACGAATATG ATCGTGGAGA GATTCGCAAG GGATGAGAAT GCCTTCTTCA AAGCATTTGA 
AACCTCAATG GTGAAGTTGG GGAGTATTGG AGTTGTAACC AGCGGGGGAG AAGTGAGATT GAATTGCAGG AAAGTGAATT CT 

Retrieve as FASTA