Entry information : PraCcP01 (Pr_38638T0 / Pr38638)
Entry ID 12864
Creation 2014-03-03 (Christophe Dunand)
Last sequence changes 2014-03-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-03-03 (Christophe Dunand)
Peroxidase information: PraCcP01 (Pr_38638T0 / Pr38638)
Name (synonym) PraCcP01 (Pr_38638T0 / Pr38638)
Class Cytochrome C peroxidase    [Orthogroup: CcP004]
Taxonomy Eukaryota Phytophthora
Organism Phytophthora ramorum    [TaxId: 164328 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PraCcP01
start..stop
S start..stop
PiCcP01 598 0 1..339 1..334
PparaCcP01 590 0 1..339 1..334
PcapCcP01 570 0 1..335 1..333
PsojCcP01 525 0 20..306 17..302
Literature and cross-references PraCcP01 (Pr_38638T0 / Pr38638)
DNA ref. JGI genome:   scaffold_1 (701843..702868)
Protein sequence: PraCcP01 (Pr_38638T0 / Pr38638)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342
PWM (Da):   %s   37675.16 Transmb domain:   %s   i40-62o
PI (pH):   %s   9.1
Sequence
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MLRRAALRAA QQASAASAAK TRGFASSQLR TASKKKQPNA IVLAAAGVAA VSGLALTDLV NAREKPVDLA AIKEEIVEIF DEDNYMGPTM VRLAWHSSGS YSKERGGSGG STGGTIRLDP  EINHGGNAGL HLAVKALEKV KKNHPEISYA DLYILAGVTM IEEMGGPEIP FRLGRPDAKS GKEPTQTPDD RLPNADMGTK DKTTQHVRDV FYRMGFDDRD IVALVGAHAI GRCYPTRSGY 
SGPWTNAEWT FSNEFFRELL ENKWTVKKWN GPMQYEDPTG KLMMLPADLV LIQDPQFKKY VELYAKDEDL WFKDFSKAFV KLTENGVKFQ ETSGWRKFFG GK 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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AAGCCCGTGG ACCTGGCCGC CATCAAGGAA GAGATCGTCG AGATCTTCGA CGAGGACAAC TACATGGGCC CCACCATGGT GCGTCTCGCG TGGCACTCGT CGGGCTCGTA CAGCAAGGAA  CGCGGCGGCA GCGGCGGCTC CACGGGCGGC ACCATCCGCT TGGACCCAGA GATCAACCAC GGTGGCAACG CCGGCCTCCA CCTGGCCGTC AAGGCGCTTG AGAAGGTCAA GAAGAACCAC  CCCGAGATCT CGTACGCCGA TCTGTACATC CTGGCGGGCG TGACCATGAT CGAGGAGATG GGCGGTCCGG AGATCCCGTT CCGGCTCGGC CGCCCTGACG CCAAGAGCGG CAAGGAGCCC  ACGCAGACGC CTGACGACCG CCTACCCAAC GCCGACATGG GCACCAAGGA CAAGACGACG CAGCACGTGC GCGACGTGTT CTACCGCATG GGCTTCGACG ACCGCGACAT TGTGGCGCTC  GTGGGTGCGC ACGCCATTGG CCGCTGCTAC CCCACGCGCA GCGGCTACAG CGGCCCGTGG ACCAACGCCG AGTGGACGTT CTCGAACGAG TTTTTCCGCG AGCTGCTCGA GAACAAGTGG  ACGGTCAAGA AGTGGAACGG CCCCATGCAG TACGAGGACC CCACGGGCAA GCTCATGATG CTGCCGGCCG ACTTAGTGCT CATCCAGGAC CCGCAGTTCA AGAAGTACGT CGAGCTGTAC 
GCCAAGGACG AGGACCTGTG GTTCAAAGAC TTCTCCAAGG CCTTCGTCAA GCTCACGGAG AACGGCGTCA AG 

Retrieve as FASTA  
CDS
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AAGCCCGTGG ACCTGGCCGC CATCAAGGAA GAGATCGTCG AGATCTTCGA CGAGGACAAC TACATGGGCC CCACCATGGT GCGTCTCGCG TGGCACTCGT CGGGCTCGTA CAGCAAGGAA  CGCGGCGGCA GCGGCGGCTC CACGGGCGGC ACCATCCGCT TGGACCCAGA GATCAACCAC GGTGGCAACG CCGGCCTCCA CCTGGCCGTC AAGGCGCTTG AGAAGGTCAA GAAGAACCAC  CCCGAGATCT CGTACGCCGA TCTGTACATC CTGGCGGGCG TGACCATGAT CGAGGAGATG GGCGGTCCGG AGATCCCGTT CCGGCTCGGC CGCCCTGACG CCAAGAGCGG CAAGGAGCCC  ACGCAGACGC CTGACGACCG CCTACCCAAC GCCGACATGG GCACCAAGGA CAAGACGACG CAGCACGTGC GCGACGTGTT CTACCGCATG GGCTTCGACG ACCGCGACAT TGTGGCGCTC  GTGGGTGCGC ACGCCATTGG CCGCTGCTAC CCCACGCGCA GCGGCTACAG CGGCCCGTGG ACCAACGCCG AGTGGACGTT CTCGAACGAG TTTTTCCGCG AGCTGCTCGA GAACAAGTGG  ACGGTCAAGA AGTGGAACGG CCCCATGCAG TACGAGGACC CCACGGGCAA GCTCATGATG CTGCCGGCCG ACTTAGTGCT CATCCAGGAC CCGCAGTTCA AGAAGTACGT CGAGCTGTAC 
GCCAAGGACG AGGACCTGTG GTTCAAAGAC TTCTCCAAGG CCTTCGTCAA GCTCACGGAG AACGGCGTCA AG 

Retrieve as FASTA