Entry information : HvPrx105
Entry ID 12894
Creation 2014-03-18 (Maxime Neel)
Last sequence changes 2014-03-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-03-20 (Christophe Dunand)
Peroxidase information: HvPrx105
Name HvPrx105
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Hordeum
Organism Hordeum vulgare (barley)    [TaxId: 4513 ]
Cellular localisation N/D
Tissue types Roots
Shoots
Inducer Methyl jasmonate treatment
Repressor N/D
Best BLASTp hits
Perox score E-value HvPrx105
start..stop
S start..stop
TaPrx23 663 0 1..359 1..357
AtaPrx23-D 630 0 32..359 31..358
TaPrx23-1D 623 0 32..359 34..361
BdiPrx120 538 0 32..355 31..354
Literature and cross-references HvPrx105
Literature Matsumoto,T.Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs Derived from 12 Clone Libraries
Protein ref. GenBank:   BAK00894.1
mRNA ref. GenBank:   AK369693.1
Cluster/Prediction ref. UniGene:   Hv.7999
Protein sequence: HvPrx105
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359 (333)
PWM (Da):   %s   37692.46 (35312.1) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.24 (5.96) Peptide Signal:   %s   cut: 27 range:27-359
Sequence
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MASSPSAARA LLLLAGAALV LSSASAAAGA GGSPPLAKGL SFEFYRAKCP QAEAIVFSFL EDAIRKDVGL AAALLRIHFH DCFVQGCDGS VLLDKTNGVD SEKVSPPNVT LRPSAFKAIN  DIRALLQRAC GGPVVSCADI AALAARDSVH LAGGPRYAVP LGRRDGLAPA SLDTILGALP PPTSKVPVLL SFLAKIGLDA DDLVALSGAH TLGIAHCGSF EERLFPKQDP VMDKFFAGQL 
KLTCPRLGVD NSTANDIRTP DVFDNKFYLD LLNRQGLFTS DQDLHTDAQT KPMVTRFAVD QAAFFDQFVK SMVKMGQINV LTGNQGQIRT DCSVPNAARS AGDELPWSVV EAAVETVVL 

Retrieve as FASTA  
Remarks Complete sequence from cDNA and 9 ESTs.
CDS
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ATGGCTTCCT CTCCGTCGGC TGCTCGTGCC CTGCTCCTCC TCGCCGGAGC AGCTCTGGTG CTGAGCTCTG CGTCCGCCGC GGCTGGTGCT GGTGGCTCGC CGCCGCTGGC CAAGGGCCTG  TCCTTCGAGT TCTACCGCGC CAAGTGCCCG CAGGCGGAGG CCATCGTCTT CTCCTTCCTC GAGGACGCCA TCCGCAAGGA CGTCGGCCTC GCCGCGGCGC TCCTCCGCAT CCACTTCCAC  GACTGCTTCG TGCAGGGCTG CGACGGCTCC GTGCTCCTCG ACAAGACCAA CGGCGTCGAC AGCGAGAAGG TGTCCCCCCC GAACGTCACG CTGCGTCCGT CGGCGTTCAA GGCCATCAAC  GACATCCGCG CGCTCCTCCA GAGGGCGTGC GGCGGGCCCG TCGTCTCCTG CGCCGACATC GCCGCGCTCG CCGCCCGCGA CTCCGTCCAC CTGGCCGGCG GGCCGAGGTA CGCCGTCCCG  CTCGGCCGCC GCGACGGGCT CGCCCCGGCG TCCCTCGACA CCATCTTGGG CGCGCTCCCG CCGCCGACCT CCAAGGTCCC CGTGCTCCTC AGCTTCCTCG CCAAGATCGG CCTCGACGCC  GACGACCTGG TGGCGCTCTC CGGCGCGCAC ACGCTCGGGA TCGCGCACTG CGGATCCTTC GAGGAGAGGC TGTTCCCCAA GCAGGACCCC GTCATGGACA AGTTTTTCGC CGGCCAGCTC  AAGCTCACCT GCCCGCGGCT CGGCGTCGAC AACTCCACCG CCAACGACAT CCGCACGCCG GACGTGTTCG ACAACAAGTT CTACTTGGAC CTGCTGAACC GGCAGGGCCT CTTCACCTCC  GACCAGGACC TGCACACCGA CGCCCAGACC AAGCCCATGG TCACCAGGTT CGCCGTCGAC CAGGCCGCCT TCTTCGACCA GTTCGTCAAG TCCATGGTGA AGATGGGGCA GATCAACGTG  CTCACTGGCA ACCAGGGCCA GATCCGCACG GACTGCTCCG TGCCCAACGC CGCCCGCAGC GCCGGTGACG AGCTGCCGTG GTCCGTCGTC GAGGCCGCCG TCGAGACCGT AGTGTTGTAG 

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cDNA
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GAGCACACCA CACCCACAGG CCACAGCTAC ATCGATCCTA CTTACATAGA CCCCCAACCC AAGCCAGATC GCCATGGCTT CCTCTCCGTC GGCTGCTCGT GCCCTGCTCC TCCTCGCCGG  AGCAGCTCTG GTGCTGAGCT CTGCGTCCGC CGCGGCTGGT GCTGGTGGCT CGCCGCCGCT GGCCAAGGGC CTGTCCTTCG AGTTCTACCG CGCCAAGTGC CCGCAGGCGG AGGCCATCGT  CTTCTCCTTC CTCGAGGACG CCATCCGCAA GGACGTCGGC CTCGCCGCGG CGCTCCTCCG CATCCACTTC CACGACTGCT TCGTGCAGGG CTGCGACGGC TCCGTGCTCC TCGACAAGAC  CAACGGCGTC GACAGCGAGA AGGTGTCCCC CCCGAACGTC ACGCTGCGTC CGTCGGCGTT CAAGGCCATC AACGACATCC GCGCGCTCCT CCAGAGGGCG TGCGGCGGGC CCGTCGTCTC  CTGCGCCGAC ATCGCCGCGC TCGCCGCCCG CGACTCCGTC CACCTGGCCG GCGGGCCGAG GTACGCCGTC CCGCTCGGCC GCCGCGACGG GCTCGCCCCG GCGTCCCTCG ACACCATCTT  GGGCGCGCTC CCGCCGCCGA CCTCCAAGGT CCCCGTGCTC CTCAGCTTCC TCGCCAAGAT CGGCCTCGAC GCCGACGACC TGGTGGCGCT CTCCGGCGCG CACACGCTCG GGATCGCGCA  CTGCGGATCC TTCGAGGAGA GGCTGTTCCC CAAGCAGGAC CCCGTCATGG ACAAGTTTTT CGCCGGCCAG CTCAAGCTCA CCTGCCCGCG GCTCGGCGTC GACAACTCCA CCGCCAACGA  CATCCGCACG CCGGACGTGT TCGACAACAA GTTCTACTTG GACCTGCTGA ACCGGCAGGG CCTCTTCACC TCCGACCAGG ACCTGCACAC CGACGCCCAG ACCAAGCCCA TGGTCACCAG  GTTCGCCGTC GACCAGGCCG CCTTCTTCGA CCAGTTCGTC AAGTCCATGG TGAAGATGGG GCAGATCAAC GTGCTCACTG GCAACCAGGG CCAGATCCGC ACGGACTGCT CCGTGCCCAA  CGCCGCCCGC AGCGCCGGTG ACGAGCTGCC GTGGTCCGTC GTCGAGGCCG CCGTCGAGAC CGTAGTGTTG TAGGTAGTAG GTTTAGTGCA TGGATCTCAA GCTTGTTTTA TGCTTTAGTA 
AGGTTTGGAC TTTGGAAGTC AGAGAGCATG CGTGTGTGGT TTGTTGAGCA AGACCGAACC AGTTGAATAA CATCCTTCGT ATG 

Retrieve as FASTA