Entry information : FvPrx17-1B (gene16249-v1.0-hybrid)
Entry ID 12904
Creation 2014-04-10 (Christophe Dunand)
Last sequence changes 2014-04-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-04-10 (Christophe Dunand)
Peroxidase information: FvPrx17-1B (gene16249-v1.0-hybrid)
Name (synonym) FvPrx17-1B (gene16249-v1.0-hybrid)
Class Class III peroxidase    [Orthogroup: Prx018]
Taxonomy Eukaryota Viridiplantae Streptophyta Rosaceae Fragaria
Organism Fragaria vesca    [TaxId: 57918 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value FvPrx17-1B
start..stop
S start..stop
FvPrx17-1A 555 0 12..318 15..321
PpePrx25 553 0 1..319 1..318
PpePrx27 549 0 1..318 1..319
PpePrx52 546 0 1..316 1..316
Literature and cross-references FvPrx17-1B (gene16249-v1.0-hybrid)
Protein sequence: FvPrx17-1B (gene16249-v1.0-hybrid)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (302)
PWM (Da):   %s   35221.78 (33196.7)  
PI (pH):   %s   5.83 (5.49) Peptide Signal:   %s   cut: 19 range:19-320
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSPLLIIFLL HMTTGATADL RTGYYSGVCP KAESIVRDVM KKALIREPRS LASVMRLQFH DCFVNGCDAS LLLDDTPTML GEKLALANIN SLRSYEVVDE AKEALEKACP GVVSCADIII  MASRDAVALT GGPGWEVKLG RLDSLTASQE ASDNVMPSPR SNATFLIDLF SKFNLSAKDM VALSGSHSIG KARCFSIMFQ LYNQSGTGKP DPAIEPKFRE KLDKLCPLNV DQNVTGDLDA 
TSVLFDNQYF KDLVSGRGFL NSDQTLFTFP RTREFVNQFS IDQEGFFKAF VEGMLKMGDL QVQQPGEIRK NCRVVNPKNN * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCTCCTC TCTTGATAAT CTTCCTCCTA CACATGACAA CCGGTGCCAC CGCAGACCTC CGGACCGGTT ATTACTCGGG AGTGTGCCCA AAAGCCGAAT CCATCGTCCG AGATGTCATG  AAGAAGGCTT TGATAAGAGA ACCCCGGAGC CTTGCCTCAG TCATGCGACT CCAGTTTCAT GATTGCTTTG TTAATGTAAG CAACTACATA TGTAAGGAAA AATATATTGA TTTCTTTCCC  TATATGCAAA GTCGAATTCT TGCTTTGTTA GGAATAGGAG TATTATATTT CGTCAATTGT TACTATCATA CACTGAACAT TACTGTATTA TTTTCGTATC CCTGTAGGGT TGTGATGCTT  CACTGTTACT TGATGACACA CCAACTATGC TCGGAGAAAA ACTCGCCCTT GCAAATATAA ATTCATTGAG ATCTTATGAA GTTGTTGATG AAGCCAAGGA AGCTTTGGAG AAGGCATGTC  CTGGAGTTGT TTCATGCGCT GATATCATTA TCATGGCTTC TAGAGATGCT GTTGCCCTGG TATTACACTA ACATCAAAGT AGTACATATA AGTTATAACT AATAAGAACT TGTGTGCTAA  GCTTATGTGC ATTTTAGATT TTTCATCGCA TATATTAGAC AGAGATAGAA TTTTTTTTTT TTTTGGTTGA AGACAGAGAT AGATTTTGAT CTAGCAAGTT CTGGATGTGG TTTGCTTATA  TCACATAATG TTTTGTAACT CAGACTGGAG GACCAGGTTG GGAAGTGAAG TTGGGAAGAT TGGATAGCTT AACAGCAAGC CAAGAAGCTT CAGACAATGT AATGCCAAGT CCAAGATCCA  ATGCCACCTT TCTCATTGAT CTATTCAGCA AATTCAATCT TTCTGCAAAA GACATGGTTG CGCTCTCTGG ATCACATTCC ATTGGCAAAG CTCGGTGCTT TTCGATCATG TTTCAGCTGT  ATAACCAATC TGGCACTGGC AAGCCGGACC CTGCCATTGA ACCCAAGTTT AGAGAAAAGC TAGACAAGCT CTGTCCTTTG AATGTGGACC AAAACGTGAC CGGAGACCTT GATGCAACAT  CAGTGCTATT TGATAATCAG TACTTCAAGG ACTTGGTTTC CGGGAGAGGG TTTCTGAATT CGGATCAAAC TCTTTTCACA TTTCCGCGGA CAAGGGAATT TGTTAATCAG TTCAGCATTG 
ATCAAGAAGG ATTTTTCAAG GCTTTTGTTG AGGGGATGCT AAAGATGGGT GACTTGCAGG TCCAGCAACC TGGGGAGATA AGGAAAAATT GCAGGGTGGT CAATCCAAAA AATAATTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCTCCTC TCTTGATAAT CTTCCTCCTA CACATGACAA CCGGTGCCAC CGCAGACCTC CGGACCGGTT ATTACTCGGG AGTGTGCCCA AAAGCCGAAT CCATCGTCCG AGATGTCATG  AAGAAGGCTT TGATAAGAGA ACCCCGGAGC CTTGCCTCAG TCATGCGACT CCAGTTTCAT GATTGCTTTG TTAATGGTTG TGATGCTTCA CTGTTACTTG ATGACACACC AACTATGCTC  GGAGAAAAAC TCGCCCTTGC AAATATAAAT TCATTGAGAT CTTATGAAGT TGTTGATGAA GCCAAGGAAG CTTTGGAGAA GGCATGTCCT GGAGTTGTTT CATGCGCTGA TATCATTATC  ATGGCTTCTA GAGATGCTGT TGCCCTGACT GGAGGACCAG GTTGGGAAGT GAAGTTGGGA AGATTGGATA GCTTAACAGC AAGCCAAGAA GCTTCAGACA ATGTAATGCC AAGTCCAAGA  TCCAATGCCA CCTTTCTCAT TGATCTATTC AGCAAATTCA ATCTTTCTGC AAAAGACATG GTTGCGCTCT CTGGATCACA TTCCATTGGC AAAGCTCGGT GCTTTTCGAT CATGTTTCAG  CTGTATAACC AATCTGGCAC TGGCAAGCCG GACCCTGCCA TTGAACCCAA GTTTAGAGAA AAGCTAGACA AGCTCTGTCC TTTGAATGTG GACCAAAACG TGACCGGAGA CCTTGATGCA  ACATCAGTGC TATTTGATAA TCAGTACTTC AAGGACTTGG TTTCCGGGAG AGGGTTTCTG AATTCGGATC AAACTCTTTT CACATTTCCG CGGACAAGGG AATTTGTTAA TCAGTTCAGC  ATTGATCAAG AAGGATTTTT CAAGGCTTTT GTTGAGGGGA TGCTAAAGAT GGGTGACTTG CAGGTCCAGC AACCTGGGGA GATAAGGAAA AATTGCAGGG TGGTCAATCC AAAAAATAAT 
TAA 

Retrieve as FASTA