Entry information : IpAPx (ROAP-2000133)
Entry ID 13002
Creation 2014-11-19 (Bruno Savelli)
Last sequence changes 2015-08-13 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-08-13 (Christophe Dunand)
Peroxidase information: IpAPx (ROAP-2000133)
Name (synonym) IpAPx (ROAP-2000133)
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Schisandraceae Illicium
Organism Illicium parviflorum    [TaxId: 13099 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value IpAPx
start..stop
S start..stop
IfAPx02 503 0 1..249 1..249
KhAPx02 472 9e-172 1..249 1..249
AoAPx01 468 4e-170 1..249 1..249
ZaAPx03 467 6e-170 1..249 1..249
Literature and cross-references IpAPx (ROAP-2000133)
Protein sequence: IpAPx (ROAP-2000133)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   249
PWM (Da):   %s   27277.93  
PI (pH):   %s   5.83
Sequence
Send to BLAST
Send to Peroxiscan
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MGKSYPTVSE EYKIAVEKCK RKLRGLIAEK NCAPLMLRLA WHSAGTYDVS TKTGGPFGTI RHSAELAHGA NNGLDIAVRL LEPLKEQFPI LSYADFYQLA GVVAVEVTGG PEIPFHPGRE  DKPEPPVEGR LPDATKGSDH LRDVFVKHMG LTDQDIVALS GGHTLGRCHK ERSGFEGAWT TNPLIFDNTY FKELLSGEKE GLLQLPSDKA LLDDPKFRPL VEKYAADEDA FFADYAEAHL 
KLSELGFAE 

Retrieve as FASTA  
Remarks Partial sequence from RNA seq. Contains an extra seq (TLLINYSEDQ) between VALSGGH and TLGRCHK.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGAAAGT CTTATCCTAC CGTAAGCGAA GAATACAAGA TCGCAGTCGA GAAATGCAAG AGAAAGCTCA GAGGGCTCAT CGCCGAGAAG AACTGTGCAC CCCTCATGCT TCGATTGGCA  TGGCATTCGG CTGGAACTTA CGATGTTTCC ACCAAAACTG GTGGCCCCTT TGGAACGATA AGGCACTCAG CTGAGCTTGC CCACGGTGCG AACAACGGTC TGGACATCGC TGTTAGGCTT  TTGGAGCCTC TTAAGGAGCA ATTTCCCATC TTGTCCTATG CGGATTTCTA TCAGTTGGCT GGTGTTGTTG CTGTTGAAGT CACTGGTGGC CCTGAGATTC CATTCCACCC TGGAAGGGAG  GACAAACCGG AGCCGCCAGT GGAAGGTCGT CTGCCTGATG CAACCAAAGG TAGCGACCAC CTAAGAGATG TATTCGTTAA GCATATGGGT CTGACTGACC AGGACATTGT TGCTCTCTCC  GGTGGTCATA CTCTGGGAAG GTGCCACAAG GAGAGATCCG GTTTCGAGGG AGCTTGGACT ACTAATCCTC TTATTTTCGA CAATACATAC TTCAAGGAGC TTTTGAGTGG AGAGAAAGAG  GGACTACTCC AGTTGCCATC TGACAAAGCA CTCCTCGATG ATCCGAAATT CCGTCCCCTC GTTGAGAAAT ACGCAGCGGA TGAGGATGCC TTCTTTGCTG ATTATGCCGA GGCTCATTTG 
AAGCTCTCGG AATTGGGGTT TGCAGAG 

Retrieve as FASTA