Entry information : GtAPx02
Entry ID 13019
Creation 2014-12-05 (Christophe Dunand)
Last sequence changes 2014-12-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-08-04 (Christophe Dunand)
Peroxidase information: GtAPx02
Name GtAPx02
Class Ascorbate peroxidase    [Orthogroup: APx002]
Taxonomy Eukaryota Cryptophyta Geminigeraceae Guillardia
Organism Guillardia theta    [TaxId: 55529 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GtAPx02
start..stop
S start..stop
PtrAPx01 479 2e-171 54..357 29..328
GtAPx01 452 1e-160 51..349 39..336
TpsAPx02 445 6e-158 46..357 19..327
TocAPx01 405 2e-142 55..358 5..307
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 249389..250483 1095  
join(complement(249389..250483))


exon

Literature and cross-references GtAPx02
DNA ref. JGI genome:   scaffold_58 (250484..249389)
EST ref. GenBank:   EG724398.1 [5' end]
Cluster/Prediction ref. Genebank:   17298275 JGI gene:   153788
Protein sequence: GtAPx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   364 (347)
PWM (Da):   %s   39015.76 (37349.8)  
PI (pH):   %s   8.74 (8.43) Peptide Signal:   %s   cut: 18 range:18-364
Sequence
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Send to Peroxiscan
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MLRKSALIAV AAAVAEAYIL PGTPLTTSCK NVAHSAISTS QQRPRVPSLR RSVSLRMATS VSKEEMTEQL KGAKKMIEDL IDKTNANPIM VRLAWHDSGT FDASINADWP KAGGAIGSIR  FEPEIKHGAN AGLAGAVKML EPVKKQFPAV SYADLFQMAS ACAIELAGGP KIDMKYGRVD AAGPQDCSPE GNLPDAEAGP NGKYGGTSGT KPTEDTTPNG HLRKVFYRMG LNDEEIVALS  GAHTLGRAFK DRSGLGAEKT KFTDGSQVAR ADGKAGIGRT GGSSWTEKWL KFDNSYFTTI PNKSADPELL KLSTDKTLFD DEGFRPFAEK FRDSQDEFFK SYANAHKKLS ELGSKFEPAD 
GIKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 1 EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGCGAA AGTCTGCTCT GATCGCTGTT GCTGCTGCTG TGGCGGAGGC CTACATCCTT CCAGGAACCC CCTTGACCAC CTCTTGCAAG AATGTGGCTC ACTCTGCTAT CAGCACCTCT  CAGCAGAGGC CAAGAGTCCC TTCCCTCAGG AGATCCGTAT CCTTGAGGAT GGCAACTTCC GTTTCCAAGG AGGAGATGAC TGAGCAGCTC AAGGGAGCCA AGAAGATGAT CGAGGACCTC  ATCGATAAGA CCAACGCCAA TCCCATCATG GTTCGTCTCG CTTGGCACGA TTCTGGTACT TTTGATGCCA GCATCAACGC GGATTGGCCC AAGGCAGGAG GCGCCATTGG ATCCATCAGG  TTCGAGCCTG AGATCAAGCA TGGAGCCAAC GCTGGCTTGG CCGGAGCTGT CAAGATGCTT GAGCCCGTCA AGAAGCAGTT CCCAGCTGTG AGCTATGCCG ATCTCTTTCA GATGGCATCT  GCATGCGCCA TTGAGCTTGC TGGAGGTCCC AAGATCGACA TGAAGTACGG TCGTGTCGAT GCTGCCGGCC CCCAGGATTG CTCCCCCGAG GGCAACCTCC CCGATGCTGA GGCTGGACCC  AACGGCAAGT ATGGAGGTAC TTCCGGAACC AAGCCCACGG AGGACACTAC CCCCAACGGT CACTTGCGCA AGGTCTTCTA CCGTATGGGA TTGAACGATG AGGAGATCGT CGCTCTCTCT  GGCGCCCACA CCCTTGGCCG TGCCTTCAAG GATCGCTCTG GACTCGGAGC AGAGAAGACT AAATTCACTG ATGGCAGCCA GGTTGCCCGT GCTGATGGCA AGGCTGGAAT CGGTAGAACT  GGTGGATCGA GCTGGACTGA GAAGTGGCTC AAGTTCGACA ACTCGTACTT TACCACCATC CCCAACAAGT CAGCTGATCC TGAGCTCTTG AAGCTGTCCA CCGACAAGAC CCTCTTCGAC  GACGAGGGCT TCCGTCCCTT CGCTGAGAAG TTCAGGGACA GCCAGGACGA ATTCTTCAAG TCCTACGCTA ATGCCCACAA GAAGCTCTCT GAGTTGGGCT CCAAGTTTGA GCCTGCGGAT 
GGCATCAAGA TTTAA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGCGAA AGTCTGCTCT GATCGCTGTT GCTGCTGCTG TGGCGGAGGC CTACATCCTT CCAGGAACCC CCTTGACCAC CTCTTGCAAG AATGTGGCTC ACTCTGCTAT CAGCACCTCT  CAGCAGAGGC CAAGAGTCCC TTCCCTCAGG AGATCCGTAT CCTTGAGGAT GGCAACTTCC GTTTCCAAGG AGGAGATGAC TGAGCAGCTC AAGGGAGCCA AGAAGATGAT CGAGGACCTC  ATCGATAAGA CCAACGCCAA TCCCATCATG GTTCGTCTCG CTTGGCACGA TTCTGGTACT TTTGATGCCA GCATCAACGC GGATTGGCCC AAGGCAGGAG GCGCCATTGG ATCCATCAGG  TTCGAGCCTG AGATCAAGCA TGGAGCCAAC GCTGGCTTGG CCGGAGCTGT CAAGATGCTT GAGCCCGTCA AGAAGCAGTT CCCAGCTGTG AGCTATGCCG ATCTCTTTCA GATGGCATCT  GCATGCGCCA TTGAGCTTGC TGGAGGTCCC AAGATCGACA TGAAGTACGG TCGTGTCGAT GCTGCCGGCC CCCAGGATTG CTCCCCCGAG GGCAACCTCC CCGATGCTGA GGCTGGACCC  AACGGCAAGT ATGGAGGTAC TTCCGGAACC AAGCCCACGG AGGACACTAC CCCCAACGGT CACTTGCGCA AGGTCTTCTA CCGTATGGGA TTGAACGATG AGGAGATCGT CGCTCTCTCT  GGCGCCCACA CCCTTGGCCG TGCCTTCAAG GATCGCTCTG GACTCGGAGC AGAGAAGACT AAATTCACTG ATGGCAGCCA GGTTGCCCGT GCTGATGGCA AGGCTGGAAT CGGTAGAACT  GGTGGATCGA GCTGGACTGA GAAGTGGCTC AAGTTCGACA ACTCGTACTT TACCACCATC CCCAACAAGT CAGCTGATCC TGAGCTCTTG AAGCTGTCCA CCGACAAGAC CCTCTTCGAC  GACGAGGGCT TCCGTCCCTT CGCTGAGAAG TTCAGGGACA GCCAGGACGA ATTCTTCAAG TCCTACGCTA ATGCCCACAA GAAGCTCTCT GAGTTGGGCT CCAAGTTTGA GCCTGCGGAT 
GGCATCAAGA TTTAA 

Retrieve as FASTA