Entry information : GbPrxQ02 (gba_locus_9285_iso_1_len_1103_ver_2)
Entry ID 13078
Creation 2015-02-18 (Christophe Dunand)
Last sequence changes 2015-02-18 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbPrxQ02 (gba_locus_9285_iso_1_len_1103_ver_2)
Name (synonym) GbPrxQ02 (gba_locus_9285_iso_1_len_1103_ver_2)
Class Atypical 2-Cysteine peroxiredoxin (type Q)    [Orthogroup: PrxQ001]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrxQ02
start..stop
S start..stop
PabPrxQ22 330 6e-116 1..216 1..219
PabPrxQ23 328 2e-115 1..216 1..219
GbPrxQ01 324 1e-113 12..216 15..222
WmPrxQ 284 7e-98 59..216 68..225
Literature and cross-references GbPrxQ02 (gba_locus_9285_iso_1_len_1103_ver_2)
Protein sequence: GbPrxQ02 (gba_locus_9285_iso_1_len_1103_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   255
PWM (Da):   %s   27587.36  
PI (pH):   %s   9.73
Sequence
Send to BLAST
Send to Peroxiscan
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MALASIYVPK ISFSLSTIYN AQKPIILDAC LAKLGPGSKS QIFGTKISSS TSWPPKPMQP RRLFSVAKVS KGDTPPSFNL KNQDGQMVSL SKFKGKPVVL YFYPADESPG CTKEACAFRD  SYEKFKKSGA EVIGVSADSP QSHKDFANKY RLPFTLLSDE GNKVRKEWGI PGDLLGSLPG RQTYVIDKNG VVQLVYNNQF QPEKHIEETL NLLQSLxNNK FSCAVTSATA LSDKVLDGQL 
ISTSVSSVGV LLSRI 

Retrieve as FASTA  
Remarks Complete sequence from RNa seq.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCACTGG CATCAATCTA TGTTCCAAAA ATTTCCTTCT CATTGTCGAC CATTTATAAT GCCCAGAAAC CAATAATACT CGATGCCTGC TTGGCGAAAT TGGGGCCTGG AAGCAAATCC  CAGATATTTG GTACCAAAAT CTCATCATCA ACCTCATGGC CGCCGAAGCC TATGCAACCA CGGAGACTCT TCTCTGTTGC CAAGGTTTCA AAAGGTGATA CACCACCATC CTTTAACTTG  AAAAACCAAG ATGGTCAAAT GGTTAGCTTA TCGAAGTTCA AGGGAAAACC AGTAGTGCTG TACTTCTATC CTGCAGATGA GAGCCCTGGG TGCACAAAGG AGGCATGTGC TTTTAGAGAT  TCATATGAGA AGTTCAAGAA GTCTGGGGCA GAAGTAATTG GAGTTAGTGC CGACAGCCCT CAATCTCATA AGGATTTTGC AAACAAGTAC AGGTTGCCCT TCACTCTGTT GAGTGATGAA  GGAAACAAAG TGAGGAAAGA ATGGGGCATT CCTGGAGACT TACTTGGGTC TCTTCCTGGG AGGCAGACAT ATGTAATTGA CAAGAATGGA GTTGTCCAAC TTGTCTACAA TAACCAGTTT  CAACCAGAGA AACACATAGA GGAGACCCTG AACTTGCTAC AGAGTCTGTG AAACAATAAG TTCTCTTGTG CAGTAACTTC TGCTACTGCA TTATCTGATA AAGTGCTTGA TGGCCAATTA 
ATTAGCACCT CCGTTTCGAG CGTTGGTGTT CTTTTGTCGA GAATATGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAAAAACTAC AACAGAGCAC TTCTCGTAGC TAAAAGGCAC TTTTAAAAAC ATTTTGATCG CTGGATTACG CATAATTCGT CTGTATCTGG CGAGGCCTCT GTCGCATTCC TCCACAATGG  CACTGGCATC AATCTATGTT CCAAAAATTT CCTTCTCATT GTCGACCATT TATAATGCCC AGAAACCAAT AATACTCGAT GCCTGCTTGG CGAAATTGGG GCCTGGAAGC AAATCCCAGA  TATTTGGTAC CAAAATCTCA TCATCAACCT CATGGCCGCC GAAGCCTATG CAACCACGGA GACTCTTCTC TGTTGCCAAG GTTTCAAAAG GTGATACACC ACCATCCTTT AACTTGAAAA  ACCAAGATGG TCAAATGGTT AGCTTATCGA AGTTCAAGGG AAAACCAGTA GTGCTGTACT TCTATCCTGC AGATGAGAGC CCTGGGTGCA CAAAGGAGGC ATGTGCTTTT AGAGATTCAT  ATGAGAAGTT CAAGAAGTCT GGGGCAGAAG TAATTGGAGT TAGTGCCGAC AGCCCTCAAT CTCATAAGGA TTTTGCAAAC AAGTACAGGT TGCCCTTCAC TCTGTTGAGT GATGAAGGAA  ACAAAGTGAG GAAAGAATGG GGCATTCCTG GAGACTTACT TGGGTCTCTT CCTGGGAGGC AGACATATGT AATTGACAAG AATGGAGTTG TCCAACTTGT CTACAATAAC CAGTTTCAAC  CAGAGAAACA CATAGAGGAG ACCCTGAACT TGCTACAGAG TCTGTGAAAC AATAAGTTCT CTTGTGCAGT AACTTCTGCT ACTGCATTAT CTGATAAAGT GCTTGATGGC CAATTAATTA  GCACCTCCGT TTCGAGCGTT GGTGTTCTTT TGTCGAGAAT ATGAGAGCAC ATCTGAATTT GGTTCCTCTC TTCCAATCCA GTGTTGTTTG TTTCAATTAT AATGTGTAGA AGTTTAACTT  ATGGCAATGT ATAATGCCTG CATTCTCTTG AAAGGCAATT CCATAGAAAG TCAAACTTCT ATTGTGTTTG AAGAAAACAG TATTGAATTC TACGCGATTC AAACATTTAT TGTAATTTCC 
TTTTGTTACA ATGTAGTTGC CCG 

Retrieve as FASTA