Entry information : GbPrx13(Ginbil_Gb_11098 / Ginbil_2038038_SGTW)
Entry ID 13083
Creation 2015-02-18 (Christophe Dunand)
Last sequence changes 2015-02-18 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx13(Ginbil_Gb_11098 / Ginbil_2038038_SGTW)
Name GbPrx13(Ginbil_Gb_11098 / Ginbil_2038038_SGTW)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx13
start..stop
S start..stop
CmichPrx14 573 0 24..327 40..343
CruPrx08 551 0 24..327 36..339
PabPrx64 541 0 6..327 12..331
PtaPrx41 539 0 6..327 12..331
Literature and cross-references GbPrx13(Ginbil_Gb_11098 / Ginbil_2038038_SGTW)
Protein sequence: GbPrx13(Ginbil_Gb_11098 / Ginbil_2038038_SGTW)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (303)
PWM (Da):   %s   35983.43 (33257.0)  
PI (pH):   %s   9.37 (9.37) Peptide Signal:   %s   cut: 25 range:25-327
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGMMNALTLL LLAFAFLQIH NVVAQLSVDY YRQTCPQVEN IIRAEMIRKQ AANPTTAAGT LRIFFHDCFV EGCDASVLIR STPNNKAERD AEINLSLPGD GFDAITRAKT AVEAKCPGIV  SCADIISITT RDLILLIGGP YYPVKKGRKD GRISQASRVA GNLPLPTMTV DRLSALFRSK GLTQADMITL SGAHTVGFAH CKEFMNRIYN YNRTFPIDPT MNFQYAKGLQ QACPRVNLDP 
TIVAFNDVNS PRKFDNGFYR NLPNGLGLLA SDQILYTDLR SRGLVQAYAT NQAAFFNAFV AAMDKLSTVG VKTGRQGDVR KRCDAFN* 

Retrieve as FASTA  
Remarks Complete from genomic (incorrect prediction from SymDB , extra seq intron 2, 2nd accession, partial), RNA seq (gba_locus_3219_iso_4_len_1542_ver_2 / Peroxidase65, incorrect prediction). No EST.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGAATGA TGAATGCTTT AACTCTGCTT CTACTGGCCT TCGCTTTCCT GCAAATTCAC AATGTTGTTG CTCAACTCTC TGTGGATTAT TACAGACAAA CATGTCCTCA AGTGGAGAAC  ATCATTCGAG CCGAAATGAT ACGAAAACAA GCTGCCAATC CCACCACCGC TGCAGGCACC CTGCGTATAT TCTTCCATGA CTGCTTTGTT GAGGGATGCG ATGCTTCAGT ACTGATTCGC  TCTACTCCCA ACAATAAGGC CGAGCGGGAC GCCGAAATAA ACCTGTCATT GCCTGGAGAT GGTTTTGATG CAATTACACG AGCAAAGACT GCTGTTGAAG CAAAATGTCC TGGCATTGTT  TCCTGTGCAG ATATCATCTC CATTACAACA AGAGACCTCA TTTTGCTGAT TGGAGGGCCT TATTATCCTG TTAAGAAGGG ACGGAAAGAT GGGCGGATCT CACAGGCCTC CAGAGTAGCA  GGAAACCTTC CCCTGCCAAC CATGACTGTG GACCGTCTCA GTGCTCTCTT TCGGTCCAAA GGCCTCACAC AGGCAGATAT GATCACTCTA TCAGGAGCCC ACACTGTGGG ATTCGCTCAC  TGTAAAGAAT TCATGAACCG GATATACAAC TACAACCGGA CCTTCCCCAT TGATCCCACC ATGAATTTTC AGTACGCCAA GGGTCTCCAA CAGGCCTGTC CTCGAGTCAA TCTAGATCCC  ACTATTGTAG CCTTCAACGA TGTCAATTCT CCAAGGAAAT TTGACAACGG TTTCTACAGA AACCTGCCAA ACGGGCTAGG GTTACTTGCT TCGGATCAGA TTCTATATAC TGACCTTCGT  TCCAGGGGTC TTGTCCAAGC CTATGCGACC AACCAGGCAG CTTTTTTCAA TGCATTTGTG GCGGCCATGG ATAAATTGAG CACCGTGGGG GTCAAGACTG GGAGGCAGGG TGATGTAAGG 
AAGAGGTGTC GATGCATTTA ATTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTTTACCTG CAATCTACTG GCCGTTCACC ACCGGGCTAT CTCCATTTAA TACACGGCAA CTTCCACAAC AACAACAACA ACAACAGACC AGCCATTCAC AGGGTGCCGA GGAATGGGAA  TGATGAATGC TTTAACTCTG CTTCTACTGG CCTTCGCTTT CCTGCAAATT CACAATGTTG TTGCTCAACT CTCTGTGGAT TATTACAGAC AAACATGTCC TCAAGTGGAG AACATCATTC  GAGCCGAAAT GATACGAAAA CAAGCTGCCA ATCCCACCAC CGCTGCAGGC ACCCTGCGTA TATTCTTCCA TGACTGCTTT GTTGAGGGAT GCGATGCTTC AGTACTGATT CGCTCTACTC  CCAACAATAA GGCCGAGCGG GACGCCGAAA TAAACCTGTC ATTGCCTGGA GATGGTTTTG ATGCAATTAC ACGAGCAAAG ACTGCTGTTG AAGCAAAATG TCCTGGCATT GTTTCCTGTG  CAGATATCAT CTCCATTACA ACAAGAGACC TCATTTTGCT GATTGGAGGG CCTTATTATC CTGTTAAGAA GGGACGGAAA GATGGGCGGA TCTCACAGGC CTCCAGAGTA GCAGGAAACC  TTCCCCTGCC AACCATGACT GTGGACCGTC TCAGTGCTCT CTTTCGGTCC AAAGGCCTCA CACAGGCAGA TATGATCACT CTATCAGGAG CCCACACTGT GGGATTCGCT CACTGTAAAG  AATTCATGAA CCGGATATAC AACTACAACC GGACCTTCCC CATTGATCCC ACCATGAATT TTCAGTACGC CAAGGGTCTC CAACAGGCCT GTCCTCGAGT CAATCTAGAT CCCACTATTG  TAGCCTTCAA CGATGTCAAT TCTCCAAGGA AATTTGACAA CGGTTTCTAC AGAAACCTGC CAAACGGGCT AGGGTTACTT GCTTCGGATC AGATTCTATA TACTGACCTT CGTTCCAGGG  GTCTTGTCCA AGCCTATGCG ACCAACCAGG CAGCTTTTTT CAATGCATTT GTGGCGGCCA TGGATAAATT GAGCACCGTG GGGGTCAAGA CTGGGAGGCA GGGTGATGTA AGGAAGAGGT  GTGATGCATT TAATTGACTC TACGCCAGTT GTTAAGCCTT GTTTTCTCTG GAAATCGTCT TTGTATGTTC TTCATAGTTG CATGGATTGT ATTGTAAACA CAGCTTGTTT TGCAAGCAGA  TTAATTCACA GGCTTCTCAC ACGGAGCCCT CAAGAGGAAT TATTTTCCAT GCGTAAGTTA AATTGCTGCA TAAATTTAAA AGAGTAGTTG GTGGTGGCTC CCTCTGCTAG CTTCATATAT  TGTACATGTC AACTTACAGT ATTCATCATT ATAGTTCCAT GGGTCGAAAG CCCGTTTGTT AACATCATTA CTTGGGAAAG GTTCCCCGTG AATCACAGTA TCTGCTCCAG GAGAGTAATA 
TGATTACATC AAACATTTAT ATTTAAAGGC AGTTTCTACT GCAAAGAGAG CATTCTGTCA TATCAAAGTC CCAAGGGCAT TACTCCCTGT CACACCTACC AC 

Retrieve as FASTA