Entry information : GbAPx06 (gba_locus_13466_iso_1_len_979_ver_2)
Entry ID 13086
Creation 2015-02-18 (Christophe Dunand)
Last sequence changes 2015-02-18 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbAPx06 (gba_locus_13466_iso_1_len_979_ver_2)
Name (synonym) GbAPx06 (gba_locus_13466_iso_1_len_979_ver_2)
Class Ascorbate peroxidase    [Orthogroup: APx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbAPx06
start..stop
S start..stop
PtaAPx01 441 8e-159 6..266 1..261
PabAPx116 425 5e-153 6..250 1..245
TsAPx02 390 4e-139 10..251 5..246
PgAPx02 388 3e-138 6..251 1..246
Literature and cross-references GbAPx06 (gba_locus_13466_iso_1_len_979_ver_2)
Protein sequence: GbAPx06 (gba_locus_13466_iso_1_len_979_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   268
PWM (Da):   %s   30033.09  
PI (pH):   %s   6.79
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MFAQMFGVVY PDVGEDYKSA VEQCRRKLRG LIQEKHCAPL ILRLAWHSAG TYDIKSKTGG PYGTIRNKEE LSHVANAGLG IAVKLLEPIK EHFPMLTYSD FYQLAGVVAV EVTGGPSIPF  HPGRKDHFDS PEEGRLPEPT GGTDHLRAVF NRMGLDDQDI VALSGGHTLG RCHKERSGYE GPWTLNPLIF DNSYFIELLA GEHEGLVQLP SDKALLQDPI FSKYVHVYAK DENAFFRDYA 
EAHLKLSELG WRRGKWYNIR CSNCFNNV 

Retrieve as FASTA  
Remarks Complete sequence from RNa seq
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTTGCAC AAATGTTTGG AGTGGTGTAT CCCGATGTGG GCGAGGACTA TAAGTCAGCT GTTGAACAAT GTCGCAGAAA GCTGCGAGGG TTAATCCAAG AAAAACACTG TGCTCCTCTG  ATTTTGCGTT TGGCATGGCA TTCTGCGGGA ACTTATGACA TAAAGAGCAA GACTGGAGGG CCATATGGGA CAATAAGAAA CAAAGAGGAA CTTTCTCATG TTGCCAATGC AGGGCTTGGA  ATTGCTGTCA AATTATTGGA ACCCATCAAA GAACATTTCC CAATGCTTAC TTATTCAGAC TTTTATCAGC TTGCAGGAGT TGTGGCCGTT GAAGTCACAG GGGGTCCCTC AATACCATTC  CATCCAGGAA GAAAAGATCA CTTTGACAGC CCTGAAGAAG GCCGGCTGCC AGAACCTACT GGAGGGACGG ATCATCTTAG AGCAGTGTTC AATAGAATGG GATTAGATGA TCAGGACATA  GTTGCGCTCT CTGGAGGCCA TACTCTGGGA AGATGCCACA AGGAGAGGTC TGGATATGAA GGTCCATGGA CGTTAAATCC TCTTATATTC GATAATTCCT ACTTCATAGA ACTGTTGGCG  GGGGAACATG AAGGATTGGT CCAACTCCCA TCTGACAAGG CTCTATTACA AGATCCCATA TTTAGTAAAT ATGTCCATGT CTATGCCAAG GATGAGAATG CATTTTTTAG GGATTACGCT 
GAAGCACATC TTAAGCTTTC GGAACTTGGA TGGAGACGTG GAAAGTGGTA CAATATAAGG TGCAGCAATT GTTTTAATAA TGTTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAAAATTAAA TTGCGAGATG TTGCTCTGAA GATTTGTCTC TGAATGCTGT TATAGTTTCA AATTAGAATT AATTTCAGTG GTGTGCAGCA TTATGTTTGC ACAAATGTTT GGAGTGGTGT  ATCCCGATGT GGGCGAGGAC TATAAGTCAG CTGTTGAACA ATGTCGCAGA AAGCTGCGAG GGTTAATCCA AGAAAAACAC TGTGCTCCTC TGATTTTGCG TTTGGCATGG CATTCTGCGG  GAACTTATGA CATAAAGAGC AAGACTGGAG GGCCATATGG GACAATAAGA AACAAAGAGG AACTTTCTCA TGTTGCCAAT GCAGGGCTTG GAATTGCTGT CAAATTATTG GAACCCATCA  AAGAACATTT CCCAATGCTT ACTTATTCAG ACTTTTATCA GCTTGCAGGA GTTGTGGCCG TTGAAGTCAC AGGGGGTCCC TCAATACCAT TCCATCCAGG AAGAAAAGAT CACTTTGACA  GCCCTGAAGA AGGCCGGCTG CCAGAACCTA CTGGAGGGAC GGATCATCTT AGAGCAGTGT TCAATAGAAT GGGATTAGAT GATCAGGACA TAGTTGCGCT CTCTGGAGGC CATACTCTGG  GAAGATGCCA CAAGGAGAGG TCTGGATATG AAGGTCCATG GACGTTAAAT CCTCTTATAT TCGATAATTC CTACTTCATA GAACTGTTGG CGGGGGAACA TGAAGGATTG GTCCAACTCC  CATCTGACAA GGCTCTATTA CAAGATCCCA TATTTAGTAA ATATGTCCAT GTCTATGCCA AGGATGAGAA TGCATTTTTT AGGGATTACG CTGAAGCACA TCTTAAGCTT TCGGAACTTG  GATGGAGACG TGGAAAGTGG TACAATATAA GGTGCAGCAA TTGTTTTAAT AATGTTTAAA AATTTGAGAT ACATTTATTG TAGACAAATT TATATTAGAT ATAGAATGTG TTATATGGTT 
TGTAATCCTA GGATAAAAA 

Retrieve as FASTA