Entry information : GbPrx15(Ginbil_Gb_27962/ Ginbil_2000726_SGTW)
Entry ID 13087
Creation 2015-02-19 (Christophe Dunand)
Last sequence changes 2015-02-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-24 (Christophe Dunand)
Peroxidase information: GbPrx15(Ginbil_Gb_27962/ Ginbil_2000726_SGTW)
Name GbPrx15(Ginbil_Gb_27962/ Ginbil_2000726_SGTW)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx15
start..stop
S start..stop
PtaPrx10 509 0 28..332 32..334
PabPrx28 509 0 37..338 43..345
PabPrx105 501 2e-180 7..338 13..343
PsiPrx05 492 7e-177 28..336 30..342
Literature and cross-references GbPrx15(Ginbil_Gb_27962/ Ginbil_2000726_SGTW)
Protein sequence: GbPrx15(Ginbil_Gb_27962/ Ginbil_2000726_SGTW)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338 (313)
PWM (Da):   %s   37196.65 (34302.3)  
PI (pH):   %s   8.05 (8.15) Peptide Signal:   %s   cut: 26 range:26-338
Sequence
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Send to Peroxiscan
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MGIEGRSAVF LYLMMTTLMW SSALCRSPAP NTDQYLLTPH FYEKSCPQAL HIVKSVVEQA VCKEARMAAS LLRLHFHDCF VKGCDASLLL DDSGSIVSEK RSNPNRNSAR GFEVVDEIKR  QLEAACPHTV SCADVLAIAA RDSVVLSGGL GWEVPLGRRD STNASLSGSN NDIPAPNSTL QTLLTKFKRQ GLNEVDLVAL SGSHTIGQSR CTSFRQRLYN QSGNGPPDLS IEKSYFEKLR 
SVCPRSGGDN NLSPLDFVSP TKFDNFYFKN LLSGRGLLNS DEELFTKSKN IMEIVKSYAE DEGLFLRQFA QSMVKMGNIS PLTCSRGEIR TNCRAVLS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (Ginbil_2000726_SGTW, very long PS predicted) and RNA seq ( gba_locus_8900_iso_6_len_1409_ver_2). No EST found.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCATCG AGGGTAGGAG CGCGGTGTTC TTGTATTTGA TGATGACTAC GCTCATGTGG TCGTCGGCGT TGTGTCGATC CCCCGCCCCA AACACTGATC AATATCTTCT CACACCTCAT  TTCTATGAAA AGTCATGTCC GCAGGCTCTG CACATCGTCA AGTCAGTAGT CGAGCAGGCC GTCTGCAAAG AAGCTCGAAT GGCCGCTTCT CTCCTCCGCC TCCACTTCCA CGATTGCTTT  GTCAAGGGGT GCGACGCATC GTTGCTGCTG GATGACAGCG GAAGCATTGT GAGCGAGAAG AGATCAAACC CAAACAGAAA CTCGGCGAGA GGATTCGAGG TGGTGGACGA GATCAAGAGG  CAACTCGAGG CCGCCTGCCC ACACACTGTC TCCTGCGCAG ATGTTCTCGC CATTGCAGCT CGTGATTCTG TTGTCCTGAG CGGAGGACTC GGCTGGGAGG TTCCTCTGGG AAGGAGGGAC  TCGACGAATG CCAGCCTGAG CGGGTCCAAC AACGACATTC CAGCCCCCAA CTCCACCCTC CAAACTCTCC TCACCAAGTT TAAACGTCAA GGCCTCAATG AAGTCGACCT TGTGGCACTC  TCAGGTAGCC ACACAATAGG GCAATCGCGA TGCACAAGTT TCAGGCAGAG GCTTTACAAT CAGAGTGGAA ATGGGCCGCC TGATTTGAGC ATCGAGAAGA GTTACTTTGA GAAACTGAGA  TCAGTATGTC CACGCTCCGG AGGGGATAAT AATTTGTCCC CCTTGGACTT CGTCAGTCCC ACTAAATTTG ACAACTTTTA CTTCAAGAAT TTGTTGAGCG GCAGAGGGCT TCTCAACTCC  GATGAGGAAC TTTTTACAAA GAGTAAAAAT ATAATGGAGA TTGTCAAATC GTATGCTGAA GACGAAGGGC TTTTCCTCAG GCAGTTTGCA CAGTCGATGG TGAAGATGGG CAACATCTCT 
CCTCTCACAT GCTCCCGTGG AGAAATCAGA ACAAACTGCC GTGCTGTGCT GAGTTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGATTCCATG GTCGCTGTTC ATCTTCCCTC GTGGAGCTTT GCCATTCATA CAATTTGCAA GTTTTTTTCC TGTTATATAA ACTTCGATCC ACCTTCTTGG TAATAGCTAT CCTCCCTCCT  TCCTTCCTTA ATCCTCCCTC AAGTATTGAA GGATTCAGAA GAGATTGTCA TTACAACTCT GAGGATGGGC ATCGAGGGTA GGAGCGCGGT GTTCTTGTAT TTGATGATGA CTACGCTCAT  GTGGTCGTCG GCGTTGTGTC GATCCCCCGC CCCAAACACT GATCAATATC TTCTCACACC TCATTTCTAT GAAAAGTCAT GTCCGCAGGC TCTGCACATC GTCAAGTCAG TAGTCGAGCA  GGCCGTCTGC AAAGAAGCTC GAATGGCCGC TTCTCTCCTC CGCCTCCACT TCCACGATTG CTTTGTCAAG GGGTGCGACG CATCGTTGCT GCTGGATGAC AGCGGAAGCA TTGTGAGCGA  GAAGAGATCA AACCCAAACA GAAACTCGGC GAGAGGATTC GAGGTGGTGG ACGAGATCAA GAGGCAACTC GAGGCCGCCT GCCCACACAC TGTCTCCTGC GCAGATGTTC TCGCCATTGC  AGCTCGTGAT TCTGTTGTCC TGAGCGGAGG ACTCGGCTGG GAGGTTCCTC TGGGAAGGAG GGACTCGACG AATGCCAGCC TGAGCGGGTC CAACAACGAC ATTCCAGCCC CCAACTCCAC  CCTCCAAACT CTCCTCACCA AGTTTAAACG TCAAGGCCTC AATGAAGTCG ACCTTGTGGC ACTCTCAGGT AGCCACACAA TAGGGCAATC GCGATGCACA AGTTTCAGGC AGAGGCTTTA  CAATCAGAGT GGAAATGGGC CGCCTGATTT GAGCATCGAG AAGAGTTACT TTGAGAAACT GAGATCAGTA TGTCCACGCT CCGGAGGGGA TAATAATTTG TCCCCCTTGG ACTTCGTCAG  TCCCACTAAA TTTGACAACT TTTACTTCAA GAATTTGTTG AGCGGCAGAG GGCTTCTCAA CTCCGATGAG GAACTTTTTA CAAAGAGTAA AAATATAATG GAGATTGTCA AATCGTATGC  TGAAGACGAA GGGCTTTTCC TCAGGCAGTT TGCACAGTCG ATGGTGAAGA TGGGCAACAT CTCTCCTCTC ACATGCTCCC GTGGAGAAAT CAGAACAAAC TGCCGTGCTG TGCTGAGTTG  AAGCGAATAT CTTTGAACCT TGGCTCGTAC TATGTTATAT TACGTGTCGA GTCTAATTAA GTTTTCTATT TTGCCTGCAC TAAGTGTCGA GTCTAATTAG ATTTTATATT TTGTAAGCAT 
CGTTTGAATC CTCAATTAGT GACAGCTTGC TATATATATC TATAGAAAGC TGAACATGTG ATCCGAATAA GGACTTGAAA TGTTACTCA 

Retrieve as FASTA