Entry information : GbPrx18(Ginbil_Gb_37313)
Entry ID 13089
Creation 2015-02-19 (Christophe Dunand)
Last sequence changes 2015-02-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx18(Ginbil_Gb_37313)
Name GbPrx18(Ginbil_Gb_37313)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx18
start..stop
S start..stop
GbPrx50 505 0 29..381 7..362
GbPrx02 499 2e-178 29..381 7..370
GbPrx20 448 2e-158 28..359 6..340
CmichPrx09 447 6e-158 32..361 10..341
Literature and cross-references GbPrx18(Ginbil_Gb_37313)
EST ref. GenBank:   EX933087.1 [3' end]
Protein sequence: GbPrx18(Ginbil_Gb_37313)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   381 (337)
PWM (Da):   %s   41587.89 (36618.4)  
PI (pH):   %s   7.39 (7.36) Peptide Signal:   %s   cut: 20 range:20-356
Sequence
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Send to Peroxiscan
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MYSSHCIFII AEDSLRKQVT ENLHGMMRTI SAILLCVFIA SANGFSINDV SIDLPNPMKG LSWTFYGKSC PNLEFIVRER LEFYLNQDIT QAAGLLRLHF HDCFVQGCDG SVLLDGSTSG  PSEKDAPPNL TLRAKAFAII NDIKQRVEAA CRGVVSCSDI LALAARDSVN KAGGPMYPVP LGRRDGLNFA TRQVTLDNLP PPTSNVTGLM SVLGKKGFTL KDLVSLSGGH TIGIGHCSSF  SNRLYPSQDP TLERNFATGL KATCPASNTN NSTNLDLRSP NVFDNKYYVD LVNKQTLFSS DQTLFTDAST RDIVQSFALD QNVFFENFVL SMIKMGQLNV LTGSQGQVRK TCNVRNPTSP 
YTTHPSTLSI VYPEESPSSS L* 

Retrieve as FASTA  
Remarks Complete sequence from genomic, RNA seq (gba_locus_56922_iso_6_len_1412_ver_2) and 1 EST.
CDS
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ATGTACTCTT CGCATTGTAT TTTCATTATT GCAGAGGATA GTTTGCGGAA ACAAGTAACG GAGAACCTGC ACGGAATGAT GAGGACCATT TCTGCTATAC TTCTGTGTGT GTTTATTGCC  TCTGCTAATG GGTTTTCAAT AAATGATGTC AGTATAGATC TGCCTAACCC TATGAAAGGC CTCTCATGGA CATTCTACGG CAAGAGTTGC CCAAATCTGG AATTTATAGT GAGGGAGCGT  CTTGAGTTTT ATTTGAATCA AGACATCACA CAGGCAGCAG GACTGCTGAG ACTCCATTTC CATGACTGCT TCGTACAGGG CTGCGATGGA TCAGTATTGT TGGATGGATC AACCAGTGGG  CCGAGTGAAA AGGATGCTCC CCCGAATTTA ACTCTGAGAG CCAAAGCGTT CGCTATTATC AATGATATCA AACAGAGGGT AGAAGCCGCC TGCAGAGGAG TTGTATCGTG TTCTGACATC  CTGGCTTTGG CAGCCCGAGA TTCTGTCAAT AAGGCCGGAG GACCAATGTA TCCAGTACCC CTCGGCCGCA GGGATGGACT TAACTTTGCT ACTCGACAGG TAACCCTTGA TAATTTACCT  CCTCCAACGT CAAATGTGAC TGGGCTCATG AGCGTTTTGG GTAAAAAAGG CTTTACTTTG AAGGATCTGG TGTCTCTCTC AGGCGGTCAC ACCATTGGAA TTGGGCACTG TTCTTCGTTC  AGCAACAGAC TGTACCCTTC ACAGGATCCA ACTCTAGAAA GGAACTTTGC CACGGGTTTA AAAGCGACGT GCCCTGCCAG TAATACCAAT AACAGCACCA ATTTGGATCT CAGGAGTCCA  AATGTGTTCG ATAACAAGTA CTATGTGGAT CTCGTAAATA AGCAGACTCT GTTCAGTTCT GATCAGACAC TGTTCACAGA CGCTAGCACC CGGGACATCG TCCAAAGTTT TGCACTCGAC  CAAAACGTGT TCTTTGAGAA CTTCGTTTTG TCCATGATTA AGATGGGTCA GCTGAACGTT CTCACTGGTA GCCAAGGACA GGTCCGCAAA ACCTGTAATG TTCGCAATCC CACTAGTCCA 
TACACCACTC ATCCCTCCAC ACTCTCTATC GTCTATCCAG AGGAATCGCC ATCAAGCTCT CTGTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCCGATCTCT TGCGTTCAAC AATCTGGTGA AGCCGCCATG CTTTCTCTTG GTTTTCTATA GTTAGAAAAT GTTGATGCAG CATATTATTA TACTGCATGT AAAATGTGTA TTGAATTGAA  GCATAATTCT TACGGTTTAA CAATTTGTTC CACAGCCGTT TGCAGAAACA AGTAACGGAG AACCTGCACG GAATGTACTC TTCGCATTGT ATTTTCATTA TTGCAGAGGA TAGTTTGCGG  AAACAAGTAA CGGAGAACCT GCACGGAATG ATGAGGACCA TTTCTGCTAT ACTTCTGTGT GTGTTTATTG CCTCTGCTAA TGGGTTTTCA ATAAATGATG TCAGTATAGA TCTGCCTAAC  CCTATGAAAG GCCTCTCATG GACATTCTAC GGCAAGAGTT GCCCAAATCT GGAATTTATA GTGAGGGAGC GTCTTGAGTT TTATTTGAAT CAAGACATCA CACAGGCAGC AGGACTGCTG  AGACTCCATT TCCATGACTG CTTCGTACAG GGCTGCGATG GATCAGTATT GTTGGATGGA TCAACCAGTG GGCCGAGTGA AAAGGATGCT CCCCCGAATT TAACTCTGAG AGCCAAAGCG  TTCGCTATTA TCAATGATAT CAAACAGAGG GTAGAAGCCG CCTGCAGAGG AGTTGTATCG TGTTCTGACA TCCTGGCTTT GGCAGCCCGA GATTCTGTCA ATAAGGCCGG AGGACCAATG  TATCCAGTAC CCCTCGGCCG CAGGGATGGA CTTAACTTTG CTACTCGACA GGTAACCCTT GATAATTTAC CTCCTCCAAC GTCAAATGTG ACTGGGCTCA TGAGCGTTTT GGGTAAAAAA  GGCTTTACTT TGAAGGATCT GGTGTCTCTC TCAGGCGGTC ACACCATTGG AATTGGGCAC TGTTCTTCGT TCAGCAACAG ACTGTACCCT TCACAGGATC CAACTCTAGA AAGGAACTTT  GCCACGGGTT TAAAAGCGAC GTGCCCTGCC AGTAATACCA ATAACAGCAC CAATTTGGAT CTCAGGAGTC CAAATGTGTT CGATAACAAG TACTATGTGG ATCTCGTAAA TAAGCAGACT  CTGTTCAGTT CTGATCAGAC ACTGTTCACA GACGCTAGCA CCCGGGACAT CGTCCAAAGT TTTGCACTCG ACCAAAACGT GTTCTTTGAG AACTTCGTTT TGTCCATGAT TAAGATGGGT  CAGCTGAACG TTCTCACTGG TAGCCAAGGA CAGGTCCGCA AAACCTGTAA TGTTCGCAAT CCCACTAGTC CATACACCAC TCATCCCTCC ACACTCTCTA TCGTCTATCC AGAGGAATCG  CCATCAAGCT CTCTGTGATC TTTGGGAGGA TTAGATGTTT TAGTTACAAT AAAGTTTGAA TCATTTAGTG TAATCTGATG TTTCGTACAC CACACCAGAA GCAAGTATGA TTTTTTGATG 
TATAGGTCGA ACCGTTTCAT TTCAAAAAAT CATACTTGCT TCTGGTG 

Retrieve as FASTA