Entry information : GbPrx20(Ginbil_Gb_37299)
Entry ID 13091
Creation 2015-02-19 (Christophe Dunand)
Last sequence changes 2015-02-19 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx20(Ginbil_Gb_37299)
Name GbPrx20(Ginbil_Gb_37299)
Class Class III peroxidase    [Orthogroup: Prx066]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx20
start..stop
S start..stop
GbPrx61 681 0 1..358 1..358
GbPrx02 516 0 1..357 1..368
GbPrx67 515 0 1..358 1..369
GbPrx68 512 0 1..354 1..365
Literature and cross-references GbPrx20(Ginbil_Gb_37299)
Protein sequence: GbPrx20(Ginbil_Gb_37299)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   358 (335)
PWM (Da):   %s   38063.76 (35619.6)  
PI (pH):   %s   4.2 (4.16) Peptide Signal:   %s   cut: 24 range:24-358
Sequence
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Send to Peroxiscan
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MEKYGKTLLS IILCACIFSS ADGLKADLPD PVAGLSWTFY NESCPNLESI VNATLDSILA QDITQAAGLL RLHFHDCFVQ GCDASVLLEG STSGPDEQDA PPNLTLRSRA FQIINQIKAA  VEANCSGVVT CADIVALAAR DSIVKAGGPE YPVPLGRRDS LTFANQSVTT SNLPPPTANI SGLMSIFGPK GFNLTDLVAL SGGHTIGLGH CSSFDNRLYN ISTGAQQQDS TLNQSLATNL 
YSICPAVNNT VNSTNLDIGS PNLFDNQYFV NIQNGNVLFT SDETLYTNTT TQNIVDSFAS NQTLFFEKFV LGMLKMGQLN VLTGSQGEIR SNCSAPNPSS YEEIIESIVD KEGSLSEL 

Retrieve as FASTA  
Remarks Complete sequence from genomic and RNA seq (gba_locus_9468_iso_1_len_1570_ver_2)
CDS
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ATGGAGAAAT ACGGAAAAAC TCTTCTTTCG ATCATTTTGT GCGCTTGCAT ATTCTCTTCT GCTGATGGTT TAAAGGCTGA TCTGCCGGAC CCAGTTGCAG GTCTGTCATG GACATTCTAC  AACGAGAGTT GCCCTAACTT GGAGTCCATA GTCAATGCGA CTCTCGACTC TATTTTGGCG CAAGATATCA CCCAAGCTGC AGGGTTGCTC CGACTCCACT TCCACGATTG CTTCGTCCAG  GGTTGCGATG CGTCGGTCTT ACTGGAAGGA TCAACAAGCG GTCCTGACGA GCAGGACGCC CCTCCCAACT TAACACTCAG AAGCCGGGCA TTCCAAATCA TCAATCAAAT CAAAGCCGCA  GTAGAAGCCA ACTGCAGTGG TGTGGTAACG TGCGCTGACA TCGTGGCTTT GGCGGCTCGG GACTCCATAG TAAAGGCCGG AGGACCGGAG TATCCTGTAC CGCTTGGTCG CAGAGACAGC  CTCACCTTTG CCAATCAATC GGTCACTACT TCTAACTTGC CTCCTCCAAC TGCAAATATT TCGGGACTTA TGAGCATATT TGGTCCCAAG GGCTTTAATT TGACGGATCT GGTTGCGCTT  TCAGGTGGAC ACACAATTGG GCTCGGCCAC TGCTCCTCCT TCGACAACAG ACTCTACAAC ATTTCCACTG GAGCCCAACA GCAGGACTCC ACTCTCAACC AGAGTTTAGC TACCAATCTT  TACTCCATAT GTCCAGCGGT TAATAATACC GTCAACAGCA CCAATTTGGA CATCGGCAGC CCAAACCTGT TCGACAACCA GTACTTCGTC AATATACAGA ATGGGAATGT CCTCTTCACC  TCCGACGAGA CGCTGTACAC AAACACCACT ACTCAAAACA TCGTCGACAG CTTTGCATCG AATCAGACGT TGTTCTTTGA AAAATTCGTG CTGGGGATGC TTAAGATGGG CCAACTTAAT 
GTACTGACTG GCAGCCAGGG AGAGATTCGA AGCAACTGCT CCGCTCCAAA TCCTTCGTCT TATGAAGAAA TTATAGAGTC TATCGTGGAT AAAGAGGGAT CTCTATCTGA GCTTTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
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GCGCCTTAGT CAAACCATTC TCGGAAAAAC TCTCTTCTTT CGATCATTTT GGAAATACTG CAGGATCGGT GTGGCAATTG CATTCAGAAA TCTGCAACTC TAATGGAGAA ATACGGAAAA  ACTCTTCTTT CGATCATTTT GTGCGCTTGC ATATTCTCTT CTGCTGATGG TTTAAAGGCT GATCTGCCGG ACCCAGTTGC AGGTCTGTCA TGGACATTCT ACAACGAGAG TTGCCCTAAC  TTGGAGTCCA TAGTCAATGC GACTCTCGAC TCTATTTTGG CGCAAGATAT CACCCAAGCT GCAGGGTTGC TCCGACTCCA CTTCCACGAT TGCTTCGTCC AGGGTTGCGA TGCGTCGGTC  TTACTGGAAG GATCAACAAG CGGTCCTGAC GAGCAGGACG CCCCTCCCAA CTTAACACTC AGAAGCCGGG CATTCCAAAT CATCAATCAA ATCAAAGCCG CAGTAGAAGC CAACTGCAGT  GGTGTGGTAA CGTGCGCTGA CATCGTGGCT TTGGCGGCTC GGGACTCCAT AGTAAAGGCC GGAGGACCGG AGTATCCTGT ACCGCTTGGT CGCAGAGACA GCCTCACCTT TGCCAATCAA  TCGGTCACTA CTTCTAACTT GCCTCCTCCA ACTGCAAATA TTTCGGGACT TATGAGCATA TTTGGTCCCA AGGGCTTTAA TTTGACGGAT CTGGTTGCGC TTTCAGGTGG ACACACAATT  GGGCTCGGCC ACTGCTCCTC CTTCGACAAC AGACTCTACA ACATTTCCAC TGGAGCCCAA CAGCAGGACT CCACTCTCAA CCAGAGTTTA GCTACCAATC TTTACTCCAT ATGTCCAGCG  GTTAATAATA CCGTCAACAG CACCAATTTG GACATCGGCA GCCCAAACCT GTTCGACAAC CAGTACTTCG TCAATATACA GAATGGGAAT GTCCTCTTCA CCTCCGACGA GACGCTGTAC  ACAAACACCA CTACTCAAAA CATCGTCGAC AGCTTTGCAT CGAATCAGAC GTTGTTCTTT GAAAAATTCG TGCTGGGGAT GCTTAAGATG GGCCAACTTA ATGTACTGAC TGGCAGCCAG  GGAGAGATTC GAAGCAACTG CTCCGCTCCA AATCCTTCGT CTTATGAAGA AATTATAGAG TCTATCGTGG ATAAAGAGGG ATCTCTATCT GAGCTTTAAA ATCGTACCAT TGGAGAGATC  AGTGCTTCCC ATGGATCTAA ACAGCTTTAT GTTATAAATC ATAAATAAAT ACTTATTTCA AATATGAAAT GTTATTACTT GCAAGGATTT ACGTGAGGCA AGATTCTGAA AAAAAGATGC  GATCTCTTCC ATAAAGTAAA ATTGGCATTC CCTCGCGTTC AATTCCATCG CATATATAAT AAGTCAACTA TTAGGCATGG AGTGACTTCG TGTATTACCC TTATGTGTGT GTTTGTTGAT  GGCAACGCAT AAAATGTTAA GTTGGAATGG TGTAGACATG TACATGTGTG CACAAATGGA GGACTACGAG ACAAATATGT TGAAAGCAAT AGTTTATTTA TATAAAATTA TGTATCTCCG 
TATATCGGGC 

Retrieve as FASTA