Entry information : GbPrx25(Ginbil_Gb_30321 / peroxidase3)
Entry ID 13097
Creation 2015-02-26 (Christophe Dunand)
Last sequence changes 2015-02-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx25(Ginbil_Gb_30321 / peroxidase3)
Name GbPrx25(Ginbil_Gb_30321 / peroxidase3)
Class Class III peroxidase    [Orthogroup: Prx024]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx25
start..stop
S start..stop
GbPrx30 478 2e-171 1..333 1..334
PabPrx65 477 3e-171 1..333 1..327
PtaPrx05 456 1e-162 1..333 1..327
PtaPrx25 452 3e-161 3..333 2..327
Literature and cross-references GbPrx25(Ginbil_Gb_30321 / peroxidase3)
Protein sequence: GbPrx25(Ginbil_Gb_30321 / peroxidase3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (343)
PWM (Da):   %s   36382.21 (37378.5) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.9 (4.75) Peptide Signal:   %s   cut: 24 range:24-366
Sequence
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Send to Peroxiscan
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MAKHTTFVAI FLLLLTYSPA FHAEFSLLSA DYYDRSCSLA LSIVRSEVTL AVLKEARMAA SLLRLHFHDC FVQGCDASVL LDDTPTFQGE KSSTANKNSL RGFDVVDAIK DKLETACPGV  VSCADILTIA ARDAVILSGG PYWDVPLGRK DSRTASLEEA NNNLPTPTSD LQTLIAKFEF QGLSVTDMVA LVGGHTIGQA RCTNFRQRIY NNQSSTESGR IVDSLIGEPH LSTLRATCPP 
SGGDDNISPL DFASPVLFDN SYYKNLINGL GLLNSDQEMY SEGSETIGIV KSYGDDPLAF WKQFADSMVK MGNIVNPLTF LTGEVRKNCR VTNF* 

Retrieve as FASTA  
Remarks Complete sequence from geneomic and RNA seq (gba_locus_13198_iso_1_len_1139_ver_2). No EST has be found
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAAC ATACAACATT TGTGGCTATT TTCCTTTTGC TTTTGACATA CAGTCCTGCC TTCCATGCAG AATTTTCATT ATTATCTGCA GATTATTACG ACAGATCATG CTCCCTTGCA  CTTTCCATTG TGAGATCAGA GGTAACACTG GCAGTGCTGA AAGAAGCTCG GATGGCAGCT TCGCTTCTTC GCCTCCATTT TCACGACTGC TTCGTCCAGG GCTGCGATGC GTCTGTGTTG  CTTGATGACA CCCCCACATT TCAGGGCGAG AAGTCGTCCA CTGCAAATAA AAATTCTCTT AGAGGATTTG ATGTAGTGGA TGCCATCAAA GACAAATTGG AGACTGCATG TCCCGGGGTT  GTTTCTTGCG CTGACATACT CACCATTGCA GCTCGTGATG CTGTCATCCT GAGTGGAGGG CCATATTGGG ACGTTCCTCT CGGAAGGAAA GATTCGAGAA CCGCGAGTTT GGAGGAGGCA  AACAACAACC TTCCCACCCC GACTTCGGAT CTACAGACTC TGATCGCAAA GTTTGAATTT CAAGGCCTTT CAGTTACAGA CATGGTCGCA CTTGTGGGCG GGCACACAAT TGGGCAGGCT  CGGTGCACAA ATTTTAGGCA GAGGATTTAT AATAACCAGT CGTCGACTGA AAGTGGTAGA ATTGTTGATT CTCTGATTGG TGAGCCACAT TTGTCTACGT TGAGGGCAAC ATGCCCTCCA  TCGGGTGGGG ATGACAACAT TTCGCCTCTG GATTTTGCAA GCCCAGTCTT ATTTGACAAT TCCTACTACA AAAACCTCAT CAATGGGCTT GGACTCCTCA ATTCCGACCA AGAGATGTAC  TCGGAGGGCA GCGAAACAAT AGGAATTGTG AAATCCTATG GAGATGATCC TTTGGCCTTT TGGAAACAGT TTGCGGATTC CATGGTGAAG ATGGGAAATA TCGTCAATCC TCTCACTTTC 
CTCACCGGTG AAGTCAGAAA GAATTGCCGC GTCACGAACT TCTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTCGTAGCCT TCTTATTGCT TCATAATAGT GATTACGAGA ATATGGCAAA ACATACAACA TTTGTGGCTA TTTTCCTTTT GCTTTTGACA TACAGTCCTG CCTTCCATGC AGAATTTTCA  TTATTATCTG CAGATTATTA CGACAGATCA TGCTCCCTTG CACTTTCCAT TGTGAGATCA GAGGTAACAC TGGCAGTGCT GAAAGAAGCT CGGATGGCAG CTTCGCTTCT TCGCCTCCAT  TTTCACGACT GCTTCGTCCA GGGCTGCGAT GCGTCTGTGT TGCTTGATGA CACCCCCACA TTTCAGGGCG AGAAGTCGTC CACTGCAAAT AAAAATTCTC TTAGAGGATT TGATGTAGTG  GATGCCATCA AAGACAAATT GGAGACTGCA TGTCCCGGGG TTGTTTCTTG CGCTGACATA CTCACCATTG CAGCTCGTGA TGCTGTCATC CTGAGTGGAG GGCCATATTG GGACGTTCCT  CTCGGAAGGA AAGATTCGAG AACCGCGAGT TTGGAGGAGG CAAACAACAA CCTTCCCACC CCGACTTCGG ATCTACAGAC TCTGATCGCA AAGTTTGAAT TTCAAGGCCT TTCAGTTACA  GACATGGTCG CACTTGTGGG CGGGCACACA ATTGGGCAGG CTCGGTGCAC AAATTTTAGG CAGAGGATTT ATAATAACCA GTCGTCGACT GAAAGTGGTA GAATTGTTGA TTCTCTGATT  GGTGAGCCAC ATTTGTCTAC GTTGAGGGCA ACATGCCCTC CATCGGGTGG GGATGACAAC ATTTCGCCTC TGGATTTTGC AAGCCCAGTC TTATTTGACA ATTCCTACTA CAAAAACCTC  ATCAATGGGC TTGGACTCCT CAATTCCGAC CAAGAGATGT ACTCGGAGGG CAGCGAAACA ATAGGAATTG TGAAATCCTA TGGAGATGAT CCTTTGGCCT TTTGGAAACA GTTTGCGGAT  TCCATGGTGA AGATGGGAAA TATCGTCAAT CCTCTCACTT TCCTCACCGG TGAAGTCAGA AAGAATTGCC GCGTCACGAA CTTCTAACGA TTGTTTTCCA ATGATGCCGA ATGCTGTCGT 
GATATTAGTT TCCCTCGTAA ATTTGGAAAT AATTATTCAT TCTTTGTCAT AAGCAGACT 

Retrieve as FASTA