Entry information : GbPrx35(Ginbil_Gb_06667/Ginbil_2032861_SGTW)
Entry ID 13126
Creation 2015-04-13 (Christophe Dunand)
Last sequence changes 2015-04-13 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-24 (Christophe Dunand)
Peroxidase information: GbPrx35(Ginbil_Gb_06667/Ginbil_2032861_SGTW)
Name GbPrx35(Ginbil_Gb_06667/Ginbil_2032861_SGTW)
Class Class III peroxidase    [Orthogroup: Prx147]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx35
start..stop
S start..stop
PabPrx227 494 3e-177 1..331 41..375
PtaPrx24 479 4e-172 19..331 11..327
AtrPrx41 411 2e-145 18..331 11..325
GbPrx27 392 2e-137 19..326 20..331
Literature and cross-references GbPrx35(Ginbil_Gb_06667/Ginbil_2032861_SGTW)
Protein sequence: GbPrx35(Ginbil_Gb_06667/Ginbil_2032861_SGTW)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331
PWM (Da):   %s   35179.36 Transmb domain:   %s   i12-34o
PI (pH):   %s   7.22
Sequence
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Send to Peroxiscan
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MQFKMARKDG VLSVYNALSI VNLLVMVVCT EAQGKTRVGF YSSTCPSVES VVQSSVQFFL NSDSTLAPAL LRMHFHDCFV QGCDASVLLE GSSTEKTAAP NQGLRGFEVI ADAKARLEAV  CPGVVSCADI LAIAARDAVV MSNGPSWEVP LGRMDGTRSS ASDVTNFPSP GDTVNTLKQK FAARGLTAQD LVALSGAHTI GQSDCKFFSY RLYNYKASGM SDPTINPNSL RQLQIICPQN 
GNGNTRVALD KGSKNSWDTN YFQNVIAGNA VLESDQGLAS DASTQSLVNT FANSINSFDS AFTQSMVKLS NIGVKTPSQG EIRRMCGVSN F 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction from SymDB, Ginbil_Gb_06667; tiny splicing error intron 1Ginbil_2032861_SGTW: part of last exon) and RNAseq (gba_locus_13978_iso_1_len_1322_ver_2). no EST found.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGTTCA AAATGGCTAG AAAAGATGGA GTTCTTAGTG TTTATAATGC GTTGAGCATT GTGAATTTGC TAGTGATGGT AGTGTGCACC GAGGCACAAG GAAAAACCAG AGTGGGATTC  TATTCTTCAA CATGTCCCAG CGTAGAATCT GTAGTTCAAT CAAGCGTTCA GTTCTTCCTC AACTCCGATA GCACACTTGC TCCCGCTCTT CTACGCATGC ACTTTCACGA CTGCTTTGTC  CAGGGTTGCG ATGCATCTGT ATTGCTGGAG GGTTCTTCAA CAGAGAAAAC TGCTGCTCCA AACCAAGGGC TACGTGGTTT TGAGGTGATA GCAGATGCAA AAGCTAGATT GGAAGCAGTC  TGCCCAGGAG TTGTGTCGTG TGCAGATATT CTTGCTATTG CTGCTCGTGA TGCTGTTGTT ATGAGCAATG GACCTTCGTG GGAAGTGCCT TTAGGAAGAA TGGATGGGAC GAGATCCTCA  GCTTCTGATG TCACCAACTT TCCCTCCCCA GGAGACACTG TCAATACTCT TAAACAAAAG TTCGCGGCCA GGGGTCTCAC AGCCCAAGAT CTCGTTGCTC TGTCTGGTGC TCACACAATT  GGGCAAAGTG ACTGCAAATT CTTCAGCTAT CGGTTATACA ACTACAAGGC CAGCGGCATG TCGGATCCAA CCATAAATCC CAACTCGCTC AGGCAGCTTC AGATCATTTG CCCTCAGAAT  GGGAACGGAA ACACTAGAGT TGCTCTTGAC AAAGGGAGCA AGAATAGTTG GGACACCAAT TACTTCCAGA ACGTTATTGC AGGAAATGCA GTGCTGGAGT CCGATCAAGG CCTCGCTTCA  GATGCTTCCA CTCAGTCTCT GGTAAACACA TTTGCCAACT CAATCAATTC CTTCGACTCC GCATTCACAC AATCCATGGT GAAGCTCAGC AATATTGGTG TCAAAACCCC ATCACAAGGT 
GAGATCAGAA GAATGTGTGG AGTCTCCAAC TTCTGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCCATAGCAT TTCTGTTTGA TGGGCTGCCC TCCAATTTTC AGTATTTTAA TGCATCCGAG TGAGACGTAA TGCAGTTCAA AATGGCTAGA AAAGATGGAG TTCTTAGTGT TTATAATGCG  TTGAGCATTG TGAATTTGCT AGTGATGGTA GTGTGCACCG AGGCACAAGG AAAAACCAGA GTGGGATTCT ATTCTTCAAC ATGTCCCAGC GTAGAATCTG TAGTTCAATC AAGCGTTCAG  TTCTTCCTCA ACTCCGATAG CACACTTGCT CCCGCTCTTC TACGCATGCA CTTTCACGAC TGCTTTGTCC AGGGTTGCGA TGCATCTGTA TTGCTGGAGG GTTCTTCAAC AGAGAAAACT  GCTGCTCCAA ACCAAGGGCT ACGTGGTTTT GAGGTGATAG CAGATGCAAA AGCTAGATTG GAAGCAGTCT GCCCAGGAGT TGTGTCGTGT GCAGATATTC TTGCTATTGC TGCTCGTGAT  GCTGTTGTTA TGAGCAATGG ACCTTCGTGG GAAGTGCCTT TAGGAAGAAT GGATGGGACG AGATCCTCAG CTTCTGATGT CACCAACTTT CCCTCCCCAG GAGACACTGT CAATACTCTT  AAACAAAAGT TCGCGGCCAG GGGTCTCACA GCCCAAGATC TCGTTGCTCT GTCTGGTGCT CACACAATTG GGCAAAGTGA CTGCAAATTC TTCAGCTATC GGTTATACAA CTACAAGGCC  AGCGGCATGT CGGATCCAAC CATAAATCCC AACTCGCTCA GGCAGCTTCA GATCATTTGC CCTCAGAATG GGAACGGAAA CACTAGAGTT GCTCTTGACA AAGGGAGCAA GAATAGTTGG  GACACCAATT ACTTCCAGAA CGTTATTGCA GGAAATGCAG TGCTGGAGTC CGATCAAGGC CTCGCTTCAG ATGCTTCCAC TCAGTCTCTG GTAAACACAT TTGCCAACTC AATCAATTCC  TTCGACTCCG CATTCACACA ATCCATGGTG AAGCTCAGCA ATATTGGTGT CAAAACCCCA TCACAAGGTG AGATCAGAAG AATGTGTGGA GTCTCCAACT TCTGACTTCA CATGAGAAGA  ATCACTCTTA GTGCTGAAAA CAAATGTCAT TCGCTGCATA ATTACCAGTT CTGATATTTG TAATGTCGAA TAAAAGTTAA GTCGCAGTGA TTAAAATTGA GGTAATTATT GCATATTTAT  GCATATTCAT TTCGTCTTTT TACTTCTAAA CGTCTTTTTT TATATGTAGC ACCTATTCCA ACTCAATCAA TTCTTATTGT CTCCCCAAGT ATTTAATTAA TAATAAGTTA GATGTACTTT 
TG 

Retrieve as FASTA