Entry information : GbPrx36(Ginbil_Gb_37292/Ginbil_2036455_SGTW)
Entry ID 13127
Creation 2015-04-13 (Christophe Dunand)
Last sequence changes 2015-04-13 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx36(Ginbil_Gb_37292/Ginbil_2036455_SGTW)
Name GbPrx36(Ginbil_Gb_37292/Ginbil_2036455_SGTW)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx36
start..stop
S start..stop
GbPrx48 507 0 8..359 10..356
GbPrx20 481 6e-172 1..356 1..356
GbPrx50 480 2e-171 1..359 1..362
GbPrx02 475 3e-169 12..359 16..370
Literature and cross-references GbPrx36(Ginbil_Gb_37292/Ginbil_2036455_SGTW)
Protein sequence: GbPrx36(Ginbil_Gb_37292/Ginbil_2036455_SGTW)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359 (339)
PWM (Da):   %s   38661.07 (36440.0)  
PI (pH):   %s   4.56 (4.54) Peptide Signal:   %s   cut: 29 range:21-359
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEKYGSTAVF VWMFIMSAAA FSIKGLRADD LPNPVEGLSW TFYSQSCPNL ESIVNATLDS ILEEDISQAA GLLRLHFHDC FVQGCDASVL LNGSASDPSE QDAPPNLTLR AQAFKIINDI  KAAVEAACSG IVSCADILTL AARDSIRKAG GPAYAVPLGR RDSLDFANES VTVANIPSPR SNVSVLMSVF GAKGFSLTDL VALSGGHTIG IGHCSSFTNR LYPTQVSTID QTFAKILYST 
CPTNTTDNTT NLDILTPNVF DNKYYVNQLN RQVLFTSDET LYFDNSTTRS ILTSFAINQA FFFQQFVVGM FKMGQLGVLT GSQGEIRKNC SVPNSSSSSY SEPSIYSIIN PEESSSYSV 

Retrieve as FASTA  
Remarks Compleet sequence from genomic and RNA seq (gba_locus_14895_iso_1_len_1722_ver_2)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAAGT ATGGCAGCAC TGCTGTTTTT GTTTGGATGT TTATAATGTC TGCCGCTGCG TTTTCGATAA AGGGTTTAAG AGCTGATGAT CTGCCGAACC CAGTTGAAGG CCTTTCATGG  ACATTCTACA GCCAAAGTTG CCCCAACTTG GAATCTATAG TCAATGCAAC TCTGGACTCC ATTTTGGAAG AAGATATCTC CCAAGCGGCT GGATTGCTCC GACTCCACTT CCACGACTGC  TTCGTCCAGG GCTGTGACGC ATCGGTCTTG CTAAACGGAT CGGCCAGTGA TCCAAGTGAG CAGGACGCTC CTCCAAATTT AACTCTGAGA GCCCAGGCAT TCAAGATAAT CAACGATATA  AAAGCCGCAG TAGAAGCCGC CTGCAGCGGA ATAGTGTCAT GCGCTGACAT CTTGACTCTA GCGGCTCGCG ACTCCATCCG GAAAGCTGGA GGACCGGCCT ATGCAGTACC TCTAGGCCGC  AGAGACAGCC TCGACTTTGC TAACGAATCA GTTACCGTTG CGAATATTCC TTCTCCACGT TCAAACGTGA GCGTTCTCAT GTCCGTTTTC GGTGCCAAAG GGTTTAGTTT GACGGATCTC  GTGGCACTCT CAGGTGGACA CACAATTGGG ATCGGACACT GCTCGTCCTT CACTAACAGG CTCTACCCAA CTCAGGTTTC GACTATAGAC CAGACATTCG CGAAGATTCT ATATTCGACA  TGCCCCACGA ATACCACCGA CAACACCACC AATCTCGACA TCCTCACTCC TAACGTCTTC GACAACAAAT ACTACGTCAA CCAACTGAAC AGACAAGTCC TCTTTACCTC CGACGAGACT  CTCTACTTCG ACAATTCCAC GACTCGAAGC ATCCTCACAA GCTTTGCAAT CAACCAGGCT TTCTTCTTTC AGCAGTTCGT GGTTGGAATG TTTAAGATGG GTCAACTTGG TGTCCTCACT  GGAAGCCAAG GAGAGATTCG GAAGAATTGC TCTGTTCCCA ATTCTTCTTC TTCTTCGTAT TCCGAGCCGT CGATATACTC CATCATCAAC CCAGAGGAAT CGTCATCCTA CTCTGTCTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGTCGGTTTA CATCGTGATC GATACACTGC AACGGATCGA ACGACTTCTT AGCGCGTTTA GGAGGCTTGA TTTTTGTGAA ATCGACAATT AATTAATTAG ATGTATCTAA CTAACGTTTT  AAGCTTTTAA TTTGGTACAG GATCGAATTC AAAGCAAAAC GAGTGGAGTG AAATCCGTAG GAAGAAGCAA TGGAGAAGTA TGGCAGCACT GCTGTTTTTG TTTGGATGTT TATAATGTCT  GCCGCTGCGT TTTCGATAAA GGGTTTAAGA GCTGATGATC TGCCGAACCC AGTTGAAGGC CTTTCATGGA CATTCTACAG CCAAAGTTGC CCCAACTTGG AATCTATAGT CAATGCAACT  CTGGACTCCA TTTTGGAAGA AGATATCTCC CAAGCGGCTG GATTGCTCCG ACTCCACTTC CACGACTGCT TCGTCCAGGG CTGTGACGCA TCGGTCTTGC TAAACGGATC GGCCAGTGAT  CCAAGTGAGC AGGACGCTCC TCCAAATTTA ACTCTGAGAG CCCAGGCATT CAAGATAATC AACGATATAA AAGCCGCAGT AGAAGCCGCC TGCAGCGGAA TAGTGTCATG CGCTGACATC  TTGACTCTAG CGGCTCGCGA CTCCATCCGG AAAGCTGGAG GACCGGCCTA TGCAGTACCT CTAGGCCGCA GAGACAGCCT CGACTTTGCT AACGAATCAG TTACCGTTGC GAATATTCCT  TCTCCACGTT CAAACGTGAG CGTTCTCATG TCCGTTTTCG GTGCCAAAGG GTTTAGTTTG ACGGATCTCG TGGCACTCTC AGGTGGACAC ACAATTGGGA TCGGACACTG CTCGTCCTTC  ACTAACAGGC TCTACCCAAC TCAGGTTTCG ACTATAGACC AGACATTCGC GAAGATTCTA TATTCGACAT GCCCCACGAA TACCACCGAC AACACCACCA ATCTCGACAT CCTCACTCCT  AACGTCTTCG ACAACAAATA CTACGTCAAC CAACTGAACA GACAAGTCCT CTTTACCTCC GACGAGACTC TCTACTTCGA CAATTCCACG ACTCGAAGCA TCCTCACAAG CTTTGCAATC  AACCAGGCTT TCTTCTTTCA GCAGTTCGTG GTTGGAATGT TTAAGATGGG TCAACTTGGT GTCCTCACTG GAAGCCAAGG AGAGATTCGG AAGAATTGCT CTGTTCCCAA TTCTTCTTCT  TCTTCGTATT CCGAGCCGTC GATATACTCC ATCATCAACC CAGAGGAATC GTCATCCTAC TCTGTCTGAT CTCTGCTTTA GTCTTGCCTC CTGCAGCTGT CCTTGCAGTT TTTATTATAA  ATTCCTACAA TAAAATAAGA GTGTAATTTT AAGAGTAGGA CTACTAATAG GGTTTTCATG TGTCGTTGCC TAGTAATTGT CAATATTCAG TATTCTCTAC AAGAACATGG GTTGGCTTCA  GATCATGAAT ACGACTGTAA ATTTATCGAA TATCTTATCT GAAAATCATA TGCCAAGTGC ATTGAATGTT CATTGACGTC CATAAAGCTT TTGATTTGTA AGCGCCCTTG GATATTATGG  CAAATCTAAT ATTACACAAA CAATACGACC GTTGTATATC CATGAGAAAT CTTATGGGGA TGTGTAAGAG ATGATGAGAT ACACACGAGT AACATGAAAT ATGTATGCAT TGTAAGTGAT 
TATTGTAAAT GAGTAATATA GACTCGTTGC ACTAGATAGC CG 

Retrieve as FASTA