Entry information : GbPrx38(Ginbil_Gb_18532)
Entry ID 13130
Creation 2015-04-13 (Christophe Dunand)
Last sequence changes 2015-04-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx38(Ginbil_Gb_18532)
Name GbPrx38(Ginbil_Gb_18532)
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx38
start..stop
S start..stop
CmichPrx04 448 9e-160 36..342 1..308
CmichPrx08 439 7e-156 7..342 1..335
PtaPrx09 438 9e-156 14..341 11..324
PabPrx118 434 2e-153 15..341 39..356
Literature and cross-references GbPrx38(Ginbil_Gb_18532)
Protein sequence: GbPrx38(Ginbil_Gb_18532)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (243)
PWM (Da):   %s   37054.03 (26224.4)  
PI (pH):   %s   9.54 (8.86) Peptide Signal:   %s   cut: 24 range:24-266
Sequence
Send to BLAST
Send to Peroxiscan
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MSRLSTLNSM AYCVAIVSVA ILLAFNARVS EGSGGLKLGF YEKSCPSAEM IVKSAVEKVV AKAPTLAATF LRMHFHDCFV RGCDGSVLLN STKSNKSEKD ATPNLTLRGF NVIDNIKAQV  EKQCPGVVSC ADVLTLVARD AVLAAFGGPF WEVPTGRRDG VKSIQSEALS NIPAPTSNFT QLKTSFSRKG LNVKDLVVLS GAHTIGIAHC SSFSNRLYNF TGKGDMDPSL DKFYAAELKT 
KKCKSLADNT TIVEMDPGSF LTFDTHYYTN LVKRRGLFQS DAALLTDGKA RKYVSKELVG SPVESISRFF LDFRQSMEKM GRIGVLTGSA GEIRKTCPFV NS* 

Retrieve as FASTA  
Remarks Complet sequence from genomic and RNA seq. (gba_locus_16876_iso_1_len_817_ver_2, 3' end is missing.)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCAGGC TTAGCACGCT AAACTCCATG GCGTACTGCG TTGCAATTGT TTCGGTCGCA ATTCTTTTGG CATTCAATGC AAGAGTTTCA GAGGGCAGTG GAGGCCTCAA ACTTGGATTC  TATGAAAAAA GCTGCCCGTC TGCTGAAATG ATAGTTAAAA GTGCTGTTGA AAAAGTTGTG GCCAAGGCTC CCACTCTGGC CGCTACTTTC TTAAGAATGC ATTTCCATGA TTGCTTTGTG  CGGGGTTGCG ATGGATCGGT GCTTTTGAAT TCTACTAAAA GCAATAAGTC TGAGAAGGAC GCTACCCCAA ATCTCACCCT GCGAGGATTT AATGTAATTG ACAATATAAA GGCTCAAGTG  GAGAAGCAAT GCCCCGGCGT AGTCTCCTGT GCAGACGTTC TTACTCTGGT TGCTCGCGAT GCTGTTCTGG CTGCGTTCGG TGGGCCGTTC TGGGAGGTTC CAACAGGGCG CAGAGATGGA  GTGAAATCGA TTCAGAGCGA GGCTCTCAGC AACATTCCAG CACCCACATC AAACTTCACG CAGCTTAAGA CCTCTTTCTC GCGTAAAGGA CTTAATGTCA AAGATCTCGT CGTATTGTCA  GGTGCCCATA CCATAGGAAT CGCACACTGC AGTTCCTTCA GCAATAGACT GTACAATTTC ACGGGCAAAG GAGATATGGA TCCTTCACTG GACAAGTTCT ATGCAGCGGA GCTCAAGACA  AAAAAGTGCA AGAGTCTGGC AGACAACACA ACCATCGTAG AAATGGATCC GGGCAGCTTC CTCACCTTCG ACACTCATTA TTACACTAAT CTCGTCAAAA GAAGAGGGCT TTTCCAGTCA  GATGCAGCTC TTCTCACTGA CGGTAAGGCA AGAAAATATG TAAGCAAGGA GTTGGTGGGG TCGCCAGTGG AATCGATCAG CCGCTTCTTT CTGGACTTCC GTCAGTCGAT GGAGAAGATG 
GGCAGAATTG GCGTTCTCAC TGGCAGCGCT GGCGAGATCA GAAAAACCTG CCCCTTCGTC AACAGCTAA 

Retrieve as FASTA