Entry information : GbPrx39 (gba_locus_24169_iso_3_len_1455_ver_2)
Entry ID 13131
Creation 2015-04-13 (Christophe Dunand)
Last sequence changes 2015-04-13 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbPrx39 (gba_locus_24169_iso_3_len_1455_ver_2)
Name (synonym) GbPrx39 (gba_locus_24169_iso_3_len_1455_ver_2)
Class Class III peroxidase    [Orthogroup: Prx019]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx39
start..stop
S start..stop
PtaPrx03 527 0 53..366 9..321
PgPrx04 521 0 31..366 3..336
CruPrx09 510 0 60..367 4..311
PabPrx42 503 1e-180 31..358 3..329
Literature and cross-references GbPrx39 (gba_locus_24169_iso_3_len_1455_ver_2)
Protein sequence: GbPrx39 (gba_locus_24169_iso_3_len_1455_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   367
PWM (Da):   %s   39151.02  
PI (pH):   %s   7.95
Sequence
Send to BLAST
Send to Peroxiscan
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MRYSFSQTLI LLLSNTCKIA YLVKAFDLHA AKMKGGSTAA IGVIFAAILA SHELGPAYGA GTVVGFYSKI CPNAERLVQL KVQRKFSSDN TIAPALLRMH FHDCFVRGCD ASLLVDSTSG  NQAEKEAGPN QTVRAYEFID EVKKVLEAVC PSKVSCADII ALATRDAVAL SGGPHYDVPT GRRDGTQSKV AEGDTLPDPT DSATQSSAAF ALKGLSVVDL VTLLGAHTVG VTHCSFFNDR  LYNFQGTGRP DPTMDPSLVN RLKVTCPDPS LGSTQDPPVA LDQGTGSIFD DSFFKQIAAK RGILLIDQQL FEDASTTGIV RSYAGFKFAP PLNFSQQFVQ SIVKMGNLGV LTGNQGTIRK 
NCRVLQA 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCGCTACT CATTCTCTCA AACTCTGATA CTTCTCTTGT CTAATACTTG TAAAATAGCT TATTTGGTGA AGGCCTTTGA TTTGCATGCT GCGAAGATGA AAGGAGGTTC TACAGCAGCC  ATTGGAGTCA TATTTGCGGC CATCCTTGCT TCCCATGAGT TGGGACCGGC CTATGGAGCA GGCACTGTGG TGGGATTTTA CAGCAAGATT TGCCCCAATG CAGAGCGGCT TGTGCAGTTG  AAAGTCCAGA GGAAATTCAG CTCCGATAAC ACAATAGCTC CTGCGCTTCT TCGCATGCAT TTTCACGATT GCTTCGTCAG AGGTTGTGAT GCATCATTAC TGGTAGATTC AACATCAGGA  AACCAAGCAG AGAAGGAAGC AGGCCCAAAT CAAACTGTGA GAGCTTATGA ATTTATTGAT GAGGTAAAAA AGGTATTGGA AGCTGTGTGT CCCAGTAAAG TATCATGCGC TGACATTATT  GCTCTGGCTA CAAGAGATGC TGTGGCTCTG TCAGGCGGAC CCCATTACGA TGTCCCAACA GGGAGAAGAG ACGGTACTCA ATCAAAGGTG GCCGAGGGCG ATACACTTCC GGATCCCACT  GACAGCGCTA CACAGTCCTC TGCAGCCTTT GCTTTGAAGG GTCTCTCTGT TGTAGACCTT GTGACACTTC TAGGCGCACA CACTGTGGGT GTTACACATT GCAGTTTCTT CAACGACCGT  CTCTATAACT TCCAAGGTAC GGGGAGGCCA GACCCTACCA TGGATCCAAG CCTTGTGAAC AGGTTAAAGG TGACATGTCC AGACCCATCA TTGGGAAGCA CGCAGGATCC ACCTGTAGCT  CTGGATCAGG GAACTGGGTC TATATTTGAT GACAGTTTCT TCAAGCAGAT TGCAGCCAAA AGAGGCATCC TGCTCATCGA TCAGCAACTG TTTGAAGACG CCAGTACAAC AGGCATAGTC  AGAAGCTACG CAGGATTCAA ATTCGCGCCT CCCTTGAATT TCAGCCAGCA ATTCGTGCAA TCCATTGTGA AAATGGGCAA CTTGGGTGTT CTGACTGGCA ATCAGGGTAC CATCAGGAAA 
AACTGCCGGG TTCTGCAAGC TTAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCCTCCTTCA CGTGAGGAAT TCGTTCGTTT GGTTGGATGA TAGTGATAAT ATGAAATTCC CAACCTAGAA GACAAAAGAC AGACTCTTTC AAGCATAAAT GCGCTACTCA TTCTCTCAAA  CTCTGATACT TCTCTTGTCT AATACTTGTA AAATAGCTTA TTTGGTGAAG GCCTTTGATT TGCATGCTGC GAAGATGAAA GGAGGTTCTA CAGCAGCCAT TGGAGTCATA TTTGCGGCCA  TCCTTGCTTC CCATGAGTTG GGACCGGCCT ATGGAGCAGG CACTGTGGTG GGATTTTACA GCAAGATTTG CCCCAATGCA GAGCGGCTTG TGCAGTTGAA AGTCCAGAGG AAATTCAGCT  CCGATAACAC AATAGCTCCT GCGCTTCTTC GCATGCATTT TCACGATTGC TTCGTCAGAG GTTGTGATGC ATCATTACTG GTAGATTCAA CATCAGGAAA CCAAGCAGAG AAGGAAGCAG  GCCCAAATCA AACTGTGAGA GCTTATGAAT TTATTGATGA GGTAAAAAAG GTATTGGAAG CTGTGTGTCC CAGTAAAGTA TCATGCGCTG ACATTATTGC TCTGGCTACA AGAGATGCTG  TGGCTCTGTC AGGCGGACCC CATTACGATG TCCCAACAGG GAGAAGAGAC GGTACTCAAT CAAAGGTGGC CGAGGGCGAT ACACTTCCGG ATCCCACTGA CAGCGCTACA CAGTCCTCTG  CAGCCTTTGC TTTGAAGGGT CTCTCTGTTG TAGACCTTGT GACACTTCTA GGCGCACACA CTGTGGGTGT TACACATTGC AGTTTCTTCA ACGACCGTCT CTATAACTTC CAAGGTACGG  GGAGGCCAGA CCCTACCATG GATCCAAGCC TTGTGAACAG GTTAAAGGTG ACATGTCCAG ACCCATCATT GGGAAGCACG CAGGATCCAC CTGTAGCTCT GGATCAGGGA ACTGGGTCTA  TATTTGATGA CAGTTTCTTC AAGCAGATTG CAGCCAAAAG AGGCATCCTG CTCATCGATC AGCAACTGTT TGAAGACGCC AGTACAACAG GCATAGTCAG AAGCTACGCA GGATTCAAAT  TCGCGCCTCC CTTGAATTTC AGCCAGCAAT TCGTGCAATC CATTGTGAAA ATGGGCAACT TGGGTGTTCT GACTGGCAAT CAGGGTACCA TCAGGAAAAA CTGCCGGGTT CTGCAAGCTT  AATACAAGGG AACCTTGTAC ATCTTGCCAA CGCAGTGGGA ACTTGATCGA CTTCGACCAG TTGCAGTATT GATAATCCAT CGATTTTCAA TGAAAATTCA TAATTTGTAT AAGCTGTTCG  CGATAATATG CAATAGTAAT AAAATTTAGG TGTCGCTTAT ATTGGGATTA TATTCAGTCT GGAAATTAAG CTTATGTGAA GGTTCTCATT ACGCCATCTC AAATTCAATT GGATTCATTT 
CAAACGTTGT TTTAG 

Retrieve as FASTA