Entry information : GbPrx41(Ginbil_Gb_00476 /Ginbil_2000473_SGTW)
Entry ID 13133
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx41(Ginbil_Gb_00476 /Ginbil_2000473_SGTW)
Name GbPrx41(Ginbil_Gb_00476 /Ginbil_2000473_SGTW)
Class Class III peroxidase     [Orthogroup: Prx015]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx41
start..stop
S start..stop
GbPrx22 496 1e-178 1..337 1..337
CmichPrx11 481 1e-172 3..337 1..337
PsiPrx02 467 6e-167 11..335 9..333
PgPrx06 464 5e-166 11..335 9..333
Literature and cross-references GbPrx41(Ginbil_Gb_00476 /Ginbil_2000473_SGTW)
Protein sequence: GbPrx41(Ginbil_Gb_00476 /Ginbil_2000473_SGTW)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (304)
PWM (Da):   %s   37236.44 (33745.5)  
PI (pH):   %s   7.11 (6.62) Peptide Signal:   %s   cut: 34 range:34-337
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGISPNNTVI RPLMELIVAV LVLLGVCVSK GSAQLRENFY AESCPNVEHI VRGVAVQKFR QNFASVTGTV RLFHHDCFVE GCDASVTVQS TKSNKAERDH PDSLTIAGDG FDTVVKAKQA  VEEQCPGKVS CADILAIANR DMIEMAGGPS YSVELGRRDG LISKSSRVEG NLPKIGFNLD QLTSLFKSKG LSQNDMIALS GVHTIGFSHC NQFADRIYNY SQSNPIDPTL NETYARELME 
MCPKNVNPTF MVALDPTTPR HFDNEFYKNL QLQKGIFTSD QVLYDDSRSR NTVNSFADNN KAFNNAFVQA MTKMGRIGVK TGVDGEIRRD CTRFNYS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (2nd accession is partial) and RNA seq (gba_locus_26724_iso_1_len_1412_ver_2). No EST found.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGAATAA GTCCAAATAA TACAGTAATT AGACCGTTAA TGGAGTTGAT AGTTGCGGTT TTAGTATTGT TGGGAGTGTG TGTAAGCAAA GGATCGGCCC AACTTCGTGA GAATTTTTAT  GCGGAAAGCT GCCCCAATGT CGAACACATA GTAAGAGGTG TTGCTGTTCA GAAATTCCGA CAGAATTTTG CCTCTGTTAC AGGCACAGTT CGTCTCTTCC ATCACGATTG CTTTGTCGAG  GGATGTGACG CCTCTGTGAC TGTTCAGTCC ACTAAAAGCA ACAAGGCTGA GAGAGATCAT CCAGATAGCC TGACAATCGC AGGTGATGGG TTTGACACTG TGGTTAAGGC CAAGCAAGCT  GTGGAGGAGC AGTGTCCTGG CAAGGTGTCT TGTGCAGATA TTCTGGCTAT AGCTAACAGG GATATGATAG AAATGGCTGG AGGACCAAGT TATAGCGTTG AGTTAGGGAG AAGAGATGGA  TTGATATCTA AATCCAGTAG AGTTGAGGGT AATCTGCCAA AGATTGGATT CAATCTCGAC CAACTGACTT CCCTCTTCAA ATCCAAGGGC CTGTCTCAGA ACGACATGAT TGCACTCTCT  GGGGTTCACA CTATAGGATT TTCCCACTGT AACCAGTTTG CAGACAGAAT TTATAACTAC AGTCAATCAA ATCCCATCGA CCCAACTTTG AATGAAACAT ATGCAAGAGA ACTGATGGAG  ATGTGCCCAA AAAACGTGAA CCCAACTTTC ATGGTGGCCT TGGATCCCAC AACTCCTCGT CATTTCGACA ATGAGTTCTA TAAAAACTTG CAGTTGCAGA AGGGGATTTT CACTTCAGAT  CAAGTTCTAT ACGACGATTC ACGTTCAAGG AACACTGTGA ACTCCTTTGC AGACAATAAC AAAGCTTTTA ATAATGCCTT CGTACAAGCG ATGACAAAAA TGGGCCGTAT TGGTGTCAAG 
ACAGGTGTTG ATGGGGAGAT CAGGCGAGAT TGCACTCGCT TCAATTATTC TTGA 

Retrieve as FASTA