Entry information : GbPrx43 (gba_locus_46355_iso_3_len_1352_ver_2)
Entry ID 13135
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbPrx43 (gba_locus_46355_iso_3_len_1352_ver_2)
Name (synonym) GbPrx43 (gba_locus_46355_iso_3_len_1352_ver_2)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx43
start..stop
S start..stop
GbPrx27 523 0 1..323 9..335
PtaPrx57 509 0 6..323 17..337
PabPrx41 464 2e-166 6..317 15..317
GbPrx57 459 3e-164 8..323 1..324
Literature and cross-references GbPrx43 (gba_locus_46355_iso_3_len_1352_ver_2)
Protein sequence: GbPrx43 (gba_locus_46355_iso_3_len_1352_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (300)
PWM (Da):   %s   34462.14 (31967.8)  
PI (pH):   %s   4.97 (4.96) Peptide Signal:   %s   cut: 24 range:24-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MESTNALMTF KLIVVFMAIV ALADPQGTRV GFYYSTCPRA ESIVQSTVRS HYNSDPTVAP GLLRLFFHDC FIEGCDGSIL ITGPSAEKNA LTNLGLRGFE VIEDAKTQVE AACPGVVSCA  DILALAVRDA VVLTRGPSWS VPTGRRDGLV SSSSDAALMP TPSDSIDVLK KKFSDKGLTA QDLVILSGAH TIGQTDCQFF SYRLYNFTST GDADPTINAQ YLSQLQSLCP SGGDGTKRVA 
LDKAGETTFD ASFFRNVRDG NAVLESDQRL WGDNTTQAVV QNYAGFGDGR FDYAFTQAIV KMGNVGVKTG SNGEIRKVCS AFN 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGTCTA CAAATGCTCT CATGACGTTT AAGCTGATTG TTGTTTTCAT GGCCATTGTG GCCTTAGCCG ACCCTCAAGG AACGAGAGTT GGGTTTTATT ATTCCACATG TCCCAGAGCC  GAGTCCATCG TCCAATCCAC CGTTCGATCA CACTATAATT CGGATCCAAC GGTGGCACCG GGGCTGCTAA GGCTTTTCTT TCACGACTGT TTTATCGAGG GTTGTGATGG ATCCATCTTA  ATTACCGGTC CATCTGCAGA GAAAAATGCT CTTACAAATC TTGGGCTACG AGGATTTGAA GTTATTGAAG ATGCAAAGAC ACAAGTAGAA GCTGCATGCC CAGGAGTTGT TTCGTGTGCT  GACATACTCG CTCTTGCAGT CCGGGATGCA GTAGTACTGA CAAGAGGACC AAGCTGGTCT GTACCAACGG GAAGGAGAGA CGGATTGGTC TCATCTTCGT CGGACGCTGC ACTTATGCCA  ACACCATCCG ACTCCATCGA CGTTCTGAAG AAAAAATTCT CTGATAAAGG CCTCACAGCA CAAGATCTCG TAATTCTTTC TGGAGCACAT ACAATTGGAC AAACTGATTG CCAATTCTTC  AGTTACCGCC TCTACAACTT CACATCCACA GGGGATGCGG ATCCCACAAT AAACGCACAA TATCTGAGTC AGCTCCAATC ATTGTGCCCT TCGGGTGGCG ATGGTACGAA GCGTGTGGCT  CTGGACAAGG CCGGCGAAAC AACATTCGAT GCGAGTTTCT TCAGGAACGT GAGGGACGGA AACGCCGTGC TTGAATCGGA CCAAAGGCTG TGGGGTGACA ACACCACCCA AGCTGTGGTT  CAAAACTATG CCGGTTTTGG GGACGGGAGG TTCGATTATG CTTTCACACA GGCTATCGTT AAGATGGGCA ACGTTGGAGT GAAGACGGGC TCTAACGGCG AAATTCGCAA AGTCTGCTCT 
GCATTCAATT GA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCTTCAATCT TGCTTTGTTT TTTGTCAAGT AGAAATTGGA GCAAATCATG GAGTCTACAA ATGCTCTCAT GACGTTTAAG CTGATTGTTG TTTTCATGGC CATTGTGGCC TTAGCCGACC  CTCAAGGAAC GAGAGTTGGG TTTTATTATT CCACATGTCC CAGAGCCGAG TCCATCGTCC AATCCACCGT TCGATCACAC TATAATTCGG ATCCAACGGT GGCACCGGGG CTGCTAAGGC  TTTTCTTTCA CGACTGTTTT ATCGAGGGTT GTGATGGATC CATCTTAATT ACCGGTCCAT CTGCAGAGAA AAATGCTCTT ACAAATCTTG GGCTACGAGG ATTTGAAGTT ATTGAAGATG  CAAAGACACA AGTAGAAGCT GCATGCCCAG GAGTTGTTTC GTGTGCTGAC ATACTCGCTC TTGCAGTCCG GGATGCAGTA GTACTGACAA GAGGACCAAG CTGGTCTGTA CCAACGGGAA  GGAGAGACGG ATTGGTCTCA TCTTCGTCGG ACGCTGCACT TATGCCAACA CCATCCGACT CCATCGACGT TCTGAAGAAA AAATTCTCTG ATAAAGGCCT CACAGCACAA GATCTCGTAA  TTCTTTCTGG AGCACATACA ATTGGACAAA CTGATTGCCA ATTCTTCAGT TACCGCCTCT ACAACTTCAC ATCCACAGGG GATGCGGATC CCACAATAAA CGCACAATAT CTGAGTCAGC  TCCAATCATT GTGCCCTTCG GGTGGCGATG GTACGAAGCG TGTGGCTCTG GACAAGGCCG GCGAAACAAC ATTCGATGCG AGTTTCTTCA GGAACGTGAG GGACGGAAAC GCCGTGCTTG  AATCGGACCA AAGGCTGTGG GGTGACAACA CCACCCAAGC TGTGGTTCAA AACTATGCCG GTTTTGGGGA CGGGAGGTTC GATTATGCTT TCACACAGGC TATCGTTAAG ATGGGCAACG  TTGGAGTGAA GACGGGCTCT AACGGCGAAA TTCGCAAAGT CTGCTCTGCA TTCAATTGAT TTCAACACCA ACGCCAAGAA GAAGCGTCCT TCAAACAAAC ACCCACCAAC AATTTTAATT  AAATGCGTCA ATTCTTGTAA TAATTAAATG TGTGGACCCG AAGAAATCAG GTTTACCATT TGACATTTGT TTCCGGAAAT AGATTTTATC GTATTTGGTC TATAGTCGTC TTCAATAAAG  GGCAATGTCC TCTGCCAGGG AAGAGTGTGT ATCACTTTCC GTTTGTTTCT TTCAATTGTA ATCAGGTCCA TCCTGAACGC TCCGAAAGAG CATAATTTAA CAGGTTCAAG TTTATGGAAG 
TTGCGTTTGT GATTAACTGA ACTTACACAA AG 

Retrieve as FASTA