Entry information : GbPrx46 (gba_locus_50904_iso_1_len_1106_ver_2)
Entry ID 13138
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbPrx46 (gba_locus_50904_iso_1_len_1106_ver_2)
Name (synonym) GbPrx46 (gba_locus_50904_iso_1_len_1106_ver_2)
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx46
start..stop
S start..stop
GbPrx10 500 3e-180 1..329 1..327
PabPrx50 438 3e-155 11..329 10..328
GbPrx52 424 3e-150 1..329 1..327
PtaPrx14 422 2e-149 11..329 8..326
Literature and cross-references GbPrx46 (gba_locus_50904_iso_1_len_1106_ver_2)
Protein sequence: GbPrx46 (gba_locus_50904_iso_1_len_1106_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (306)
PWM (Da):   %s   35337.9 (32884.5)  
PI (pH):   %s   8.67 (9.02) Peptide Signal:   %s   cut: 26 range:24-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MALIDAACLI LKLLLICISL VETSGAQLSP VFYKASCPRL EELVQRVVKQ AVDKDPRMAA SLLRLNFHDC FVNGCDASVL LDDTGAFQGE KTAVPNNNSL RGFEVIDNIK TAVEKSCSST  VSCADIITIA ARDAVVLAGG PTWTPMLGRR DSRTASLNAA NTAIPAPNNT LAAIISKCKA VGLSVQDCVT LSGAHTIGRA RCTSFSSRLY NFVKTGNPDP TINSSYLNTL RGICPQGGNG 
NAVTPLDQTT RDKFDNNYFT NLQNNQGLLQ SDQEFFSTTG ASTIPLVKLY SRNQSAFFKN FQTSMINMGN IKPLTGSNGE IRRNCRKMN 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq. No EST found.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTTAA TCGACGCAGC TTGCTTAATT TTGAAGCTTT TACTGATTTG CATTTCACTT GTAGAAACGA GTGGAGCTCA ACTGAGTCCC GTGTTTTACA AGGCTTCCTG CCCGAGGCTT  GAAGAACTTG TTCAGCGAGT GGTTAAGCAA GCTGTTGACA AGGATCCTCG GATGGCAGCT TCTCTTCTCC GCCTCAACTT TCACGATTGC TTCGTTAATG GATGTGATGC ATCGGTGTTG  CTTGATGACA CTGGTGCATT TCAAGGCGAA AAAACGGCTG TTCCAAACAA CAACTCGTTA AGAGGATTTG AAGTCATAGA CAACATTAAA ACAGCCGTCG AGAAATCGTG CAGCTCCACA  GTCTCTTGCG CGGACATCAT CACTATTGCT GCTAGAGATG CAGTTGTTCT CGCGGGAGGC CCAACTTGGA CTCCCATGTT AGGAAGAAGG GACAGCAGAA CTGCAAGTTT AAACGCAGCA  AACACGGCGA TTCCAGCACC AAACAACACC CTGGCTGCCA TAATTTCCAA ATGTAAAGCA GTCGGACTAT CAGTTCAAGA TTGCGTAACA TTATCAGGTG CTCATACCAT TGGACGGGCT  CGCTGCACAA GTTTCAGTTC TCGACTATAT AATTTTGTCA AAACGGGAAA TCCAGACCCT ACTATAAACT CTTCTTATTT AAACACTCTA CGGGGAATCT GCCCTCAGGG AGGTAATGGC  AATGCAGTGA CTCCACTTGA CCAGACCACG CGAGACAAGT TTGACAACAA TTATTTTACA AATTTACAGA ATAATCAAGG CCTTCTACAG TCTGATCAGG AATTTTTTTC TACAACTGGA  GCATCTACAA TACCCCTGGT GAAACTTTAC AGTAGAAACC AAAGCGCTTT CTTTAAGAAT TTCCAGACTT CCATGATAAA CATGGGAAAT ATAAAGCCTC TTACGGGTAG CAACGGGGAA 
ATACGGCGCA ATTGCAGAAA AATGAATTAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TAGCTGTCGG CAATGGCCTT AATCGACGCA GCTTGCTTAA TTTTGAAGCT TTTACTGATT TGCATTTCAC TTGTAGAAAC GAGTGGAGCT CAACTGAGTC CCGTGTTTTA CAAGGCTTCC  TGCCCGAGGC TTGAAGAACT TGTTCAGCGA GTGGTTAAGC AAGCTGTTGA CAAGGATCCT CGGATGGCAG CTTCTCTTCT CCGCCTCAAC TTTCACGATT GCTTCGTTAA TGGATGTGAT  GCATCGGTGT TGCTTGATGA CACTGGTGCA TTTCAAGGCG AAAAAACGGC TGTTCCAAAC AACAACTCGT TAAGAGGATT TGAAGTCATA GACAACATTA AAACAGCCGT CGAGAAATCG  TGCAGCTCCA CAGTCTCTTG CGCGGACATC ATCACTATTG CTGCTAGAGA TGCAGTTGTT CTCGCGGGAG GCCCAACTTG GACTCCCATG TTAGGAAGAA GGGACAGCAG AACTGCAAGT  TTAAACGCAG CAAACACGGC GATTCCAGCA CCAAACAACA CCCTGGCTGC CATAATTTCC AAATGTAAAG CAGTCGGACT ATCAGTTCAA GATTGCGTAA CATTATCAGG TGCTCATACC  ATTGGACGGG CTCGCTGCAC AAGTTTCAGT TCTCGACTAT ATAATTTTGT CAAAACGGGA AATCCAGACC CTACTATAAA CTCTTCTTAT TTAAACACTC TACGGGGAAT CTGCCCTCAG  GGAGGTAATG GCAATGCAGT GACTCCACTT GACCAGACCA CGCGAGACAA GTTTGACAAC AATTATTTTA CAAATTTACA GAATAATCAA GGCCTTCTAC AGTCTGATCA GGAATTTTTT  TCTACAACTG GAGCATCTAC AATACCCCTG GTGAAACTTT ACAGTAGAAA CCAAAGCGCT TTCTTTAAGA ATTTCCAGAC TTCCATGATA AACATGGGAA ATATAAAGCC TCTTACGGGT  AGCAACGGGG AAATACGGCG CAATTGCAGA AAAATGAATT AGTTGATATT CTATTTGCCT TTTAAAAGAA ACAGTCTGTG GTGTCAATAG ATATTCGTAC AATGCATTTC GTTATATATA 
TTTTGGACAA TGCATTTCTC TCTCTC 

Retrieve as FASTA