Entry information : GbPrx50(Ginbil_Gb_37297)
Entry ID 13142
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx50(Ginbil_Gb_37297)
Name GbPrx50(Ginbil_Gb_37297)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx50
start..stop
S start..stop
GbPrx02 557 0 1..362 1..370
PtaPrx48 514 0 1..361 1..347
CmichPrx09 509 0 1..355 1..353
PabPrx03 509 0 1..360 1..346
Literature and cross-references GbPrx50(Ginbil_Gb_37297)
Protein sequence: GbPrx50(Ginbil_Gb_37297)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   362 (341)
PWM (Da):   %s   38924.46 (36661.3) Transmb domain:   %s   i5-24o
PI (pH):   %s   6.01 (5.62) Peptide Signal:   %s   cut: 22 range:22-362
Sequence
Send to BLAST
Send to Peroxiscan
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MAKYVITLAA MFFCVFVVAS ANAFSAKDVN ALPPPVQGLS WTFYNQSCPN LESIVKARID FYLNQDITQA AGLLRLHFHD CFVQGCDASV LLNATSSEQV APPNLTLRAM AFRIINDIKS  AVEAACTGIV SCADILAIAA RDSIEKAGGP GYPVPLGRRD SLNFANASVT LANLPPPTSN VTGLIGVLGP KGFNFTDLVA LSGGHTIGIG HCSSFANRLY NTSTGAQQQD PTLEQNFANS  LYTICPTANN TVNSTNLDLR TPNLFDNKYY VDLLNRQTLF TSDQSLYSDS RTRDIVASFA LNQTLFYEKF VLGMLKMAQL NVLTGSQGQI RKNCSVANPT SSYFDASIHS IVDPEDSSYS 
SM 

Retrieve as FASTA  
Remarks Complete sequence from genomic and RNA seq (gba_locus_56719_iso_1_len_1258_ver_2)
CDS
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ATGGCGAAGT ATGTCATTAC TCTCGCTGCT ATGTTTTTCT GTGTGTTCGT AGTAGCCTCT GCCAATGCGT TTTCTGCAAA GGATGTGAAT GCTCTGCCGC CTCCCGTTCA AGGCCTTTCA  TGGACTTTCT ACAATCAAAG TTGTCCAAAT TTGGAATCAA TAGTGAAGGC GCGTATTGAT TTTTATTTGA ATCAAGATAT CACTCAAGCA GCAGGCTTGC TGAGACTGCA CTTCCATGAC  TGCTTCGTGC AGGGTTGCGA CGCGTCCGTC TTACTAAATG CGACATCTAG CGAGCAGGTT GCTCCCCCAA ATCTCACTCT GAGAGCCATG GCATTCAGGA TTATCAATGA TATAAAATCC  GCAGTCGAGG CCGCATGCAC TGGAATCGTG TCCTGCGCTG ACATCTTGGC GATAGCTGCT CGTGACTCCA TAGAAAAGGC GGGGGGACCG GGGTATCCAG TACCGCTAGG CCGCAGAGAC  AGCCTCAACT TTGCGAATGC GTCAGTTACC CTTGCCAATT TGCCTCCGCC GACCTCAAAT GTGACGGGAC TTATCGGAGT TTTGGGTCCC AAAGGCTTCA ATTTTACAGA CCTGGTGGCG  CTCTCAGGTG GACACACAAT TGGCATTGGT CACTGCAGCT CCTTCGCCAA CAGACTCTAC AACACCTCTA CAGGCGCCCA ACAGCAAGAT CCGACTTTAG AGCAGAATTT TGCTAACAGT  CTTTATACGA TATGCCCGAC GGCTAATAAC ACCGTCAACA GCACCAACTT GGATCTCCGC ACGCCCAACC TTTTCGACAA CAAGTACTAC GTCGATCTCC TGAATAGACA AACTCTTTTC  ACCTCCGATC AGAGTCTCTA CTCAGACTCC CGTACTCGAG ACATTGTTGC GAGCTTTGCA CTCAACCAGA CGTTGTTCTA CGAAAAGTTT GTTTTGGGGA TGCTGAAGAT GGCTCAACTT  AATGTCTTGA CGGGCAGCCA GGGACAGATC CGCAAGAACT GCTCAGTTGC CAATCCGACC TCTTCATACT TCGATGCATC TATCCACTCG ATCGTCGATC CAGAGGATTC ATCATACTCC 
TCTATGTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
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GAAGAATCTG GGTATTTGGC TTAATCAAAG CAAAGGGAGC AGGGGGACGG ATCTGTAACA GGCAGAAACA ATGGCGAAGT ATGTCATTAC TCTCGCTGCT ATGTTTTTCT GTGTGTTCGT  AGTAGCCTCT GCCAATGCGT TTTCTGCAAA GGATGTGAAT GCTCTGCCGC CTCCCGTTCA AGGCCTTTCA TGGACTTTCT ACAATCAAAG TTGTCCAAAT TTGGAATCAA TAGTGAAGGC  GCGTATTGAT TTTTATTTGA ATCAAGATAT CACTCAAGCA GCAGGCTTGC TGAGACTGCA CTTCCATGAC TGCTTCGTGC AGGGTTGCGA CGCGTCCGTC TTACTAAATG CGACATCTAG  CGAGCAGGTT GCTCCCCCAA ATCTCACTCT GAGAGCCATG GCATTCAGGA TTATCAATGA TATAAAATCC GCAGTCGAGG CCGCATGCAC TGGAATCGTG TCCTGCGCTG ACATCTTGGC  GATAGCTGCT CGTGACTCCA TAGAAAAGGC GGGGGGACCG GGGTATCCAG TACCGCTAGG CCGCAGAGAC AGCCTCAACT TTGCGAATGC GTCAGTTACC CTTGCCAATT TGCCTCCGCC  GACCTCAAAT GTGACGGGAC TTATCGGAGT TTTGGGTCCC AAAGGCTTCA ATTTTACAGA CCTGGTGGCG CTCTCAGGTG GACACACAAT TGGCATTGGT CACTGCAGCT CCTTCGCCAA  CAGACTCTAC AACACCTCTA CAGGCGCCCA ACAGCAAGAT CCGACTTTAG AGCAGAATTT TGCTAACAGT CTTTATACGA TATGCCCGAC GGCTAATAAC ACCGTCAACA GCACCAACTT  GGATCTCCGC ACGCCCAACC TTTTCGACAA CAAGTACTAC GTCGATCTCC TGAATAGACA AACTCTTTTC ACCTCCGATC AGAGTCTCTA CTCAGACTCC CGTACTCGAG ACATTGTTGC  GAGCTTTGCA CTCAACCAGA CGTTGTTCTA CGAAAAGTTT GTTTTGGGGA TGCTGAAGAT GGCTCAACTT AATGTCTTGA CGGGCAGCCA GGGACAGATC CGCAAGAACT GCTCAGTTGC  CAATCCGACC TCTTCATACT TCGATGCATC TATCCACTCG ATCGTCGATC CAGAGGATTC ATCATACTCC TCTATGTGAT ATTTTCCTAC TCCGTGTGAT ATTTTATTAC TATATTATCA 
GTCTACTACT AGAAAGACTG CATAAACACA TTATAAAATA TCACACGGAG TAGGAAAA 

Retrieve as FASTA