Entry information : GbPrx52(Ginbil_Gb_04820)
Entry ID 13144
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-26 (Christophe Dunand)
Peroxidase information: GbPrx52(Ginbil_Gb_04820)
Name GbPrx52(Ginbil_Gb_04820)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx52
start..stop
S start..stop
PabPrx50 525 0 3..327 1..328
PtaPrx14 515 0 1..328 1..327
PabPrx98 511 0 1..328 1..329
PabPrx40 475 8e-170 1..327 1..331
Literature and cross-references GbPrx52(Ginbil_Gb_04820)
Protein sequence: GbPrx52(Ginbil_Gb_04820)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328
PWM (Da):   %s   34661.78  
PI (pH):   %s   4.56
Sequence
Send to BLAST
Send to Peroxiscan
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MAFRFACCFV GVIWIVLIGC TTNAQLTSNF YQNTCPNVIS IVNQTIQQAL QSDSRIAASL LRLHFHDCFV NGCDGSVLLN DTTNFTGEQT AAPNINSLRG FGVVDNIKSA VESACNGTVS  CADLLAIAAA QSVMLSGGPS WTVLLGRRDS TTANLTTANS AIPAPTDNLT TIINKFSNVG LSVTDVVALS GAHTFGRARC TVFSARLYNF SGTGNPDPTL NSTYLSTLQT TCPQNGNGNT 
TTPLDPTTQD TFDSNYFTNL QSNMGLLQSD QELFSTSGAS TISIVNDYAG SQTDFFTNFS NSMINMGNIS PLTGTSGEIR LNCGKVNG* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and RNA seq. (gba_locus_62655_iso_1_len_836_ver_2, 5'end is missing, and gba_locus_67582_iso_1_len_338_ver_2, exon 1). No EST found.
CDS
Send to BLAST
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ATGGCATTTA GATTTGCTTG TTGCTTCGTA GGAGTTATTT GGATTGTGTT GATAGGATGC ACTACCAACG CTCAGCTAAC TTCTAATTTT TACCAGAATA CATGCCCCAA TGTAATCAGT  ATAGTGAACC AGACTATTCA GCAAGCTCTG CAGAGTGATT CCAGGATAGC GGCGTCACTT CTTCGTCTCC ATTTTCACGA CTGCTTTGTG AACGGATGCG ACGGATCGGT TCTTCTTAAT  GACACAACCA ACTTTACAGG CGAGCAGACT GCAGCTCCGA ACATCAATTC TTTGAGAGGC TTCGGCGTGG TGGACAACAT TAAGTCTGCG GTGGAGAGTG CGTGCAACGG AACAGTTTCA  TGTGCCGACC TTCTAGCAAT TGCCGCAGCC CAGTCAGTAA TGTTGTCCGG CGGCCCATCA TGGACTGTAC TGCTCGGAAG AAGGGACAGC ACTACTGCTA ATTTAACTAC TGCAAACTCA  GCCATACCTG CACCGACCGA TAATCTTACG ACAATCATAA ACAAGTTCTC CAATGTCGGA CTCTCTGTTA CGGACGTTGT TGCTTTGTCA GGAGCGCACA CATTCGGGCG AGCTCGGTGC  ACAGTATTCA GCGCTCGGCT TTACAATTTC AGCGGAACCG GCAATCCAGA TCCCACGCTT AATTCCACTT ATCTCTCCAC CTTGCAAACC ACGTGTCCTC AGAATGGAAA CGGGAACACG  ACAACTCCGC TTGATCCAAC AACTCAAGAC ACTTTTGACA GTAATTACTT CACAAACCTT CAAAGTAACA TGGGGCTTCT TCAGTCGGAC CAGGAATTGT TTTCCACTAG CGGAGCAAGC  ACAATATCAA TTGTAAACGA TTACGCTGGT AGCCAGACTG ATTTTTTTAC CAATTTCTCC AACTCTATGA TCAACATGGG TAACATAAGT CCTTTGACTG GAACCAGCGG AGAAATTCGC 
CTCAATTGTG GGAAGGTTAA CGGGTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
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ATGGCATTTA GATTTGCTTG TTGCTTCGTA GGAGTTATTT GGATTGTGTT GATAGGATGC ACTACCAACG CTCAGCTAAC TTCTAATTTT TACCAGAATA CATGCCCCAA TGTAATCAGT  ATAGTGAACC AGACTATTCA GCAAGCTCTG CAGAGTGATT CCAGGATAGC GGCGTCACTT CTTCGTCTCC ATTTTCACGA CTGCTTTGTG AACGGATGCG ACGGATCGGT TCTTCTTAAT  GACACAACCA ACTTTACAGG CGAGCAGACT GCAGCTCCGA ACATCAATTC TTTGAGAGGC TTCGGCGTGG TGGACAACAT TAAGTCTGCG GTGGAGAGTG CGTGCAACGG AACAGTTTCA  TGTGCCGACC TTCTAGCAAT TGCCGCAGCC CAGTCAGTAA TGTTGTCCGG CGGCCCATCA TGGACTGTAC TGCTCGGAAG AAGGGACAGC ACTACTGCTA ATTTAACTAC TGCAAACTCA  GCCATACCTG CACCGACCGA TAATCTTACG ACAATCATAA ACAAGTTCTC CAATGTCGGA CTCTCTGTTA CGGACGTTGT TGCTTTGTCA GGAGCGCACA CATTCGGGCG AGCTCGGTGC  ACAGTATTCA GCGCTCGGCT TTACAATTTC AGCGGAACCG GCAATCCAGA TCCCACGCTT AATTCCACTT ATCTCTCCAC CTTGCAAACC ACGTGTCCTC AGAATGGAAA CGGGAACACG  ACAACTCCGC TTGATCCAAC AACTCAAGAC ACTTTTGACA GTAATTACTT CACAAACCTT CAAAGTAACA TGGGGCTTCT TCAGTCGGAC CAGGAATTGT TTTCCACTAG CGGAGCAAGC  ACAATATCAA TTGTAAACGA TTACGCTGGT AGCCAGACTG ATTTTTTTAC CAATTTCTCC AACTCTATGA TCAACATGGG TAACATAAGT CCTTTGACTG GAACCAGCGG AGAAATTCGC 
CTCAATTGTG GGAAGGTTAA CGGGTGAACT GAAGTCTTTA TCATAATCTA CTGGCGTGAC ATGTAAAATC TTCTCAAGAG CGACAGGGAA GGCCAAATGA TG 

Retrieve as FASTA