Entry information : GbPrx53(Ginbil_2038668_SGTW)
Entry ID 13145
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx53(Ginbil_2038668_SGTW)
Name GbPrx53(Ginbil_2038668_SGTW)
Class Class III peroxidase    [Orthogroup: Prx034]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx53
start..stop
S start..stop
PabPrx206 498 3e-179 7..331 11..335
SmPrx77-1_52 384 3e-134 36..330 32..327
SmPrx77-2_155 381 3e-133 36..330 32..327
CruPrx14 363 8e-128 77..291 2..216
Literature and cross-references GbPrx53(Ginbil_2038668_SGTW)
Protein sequence: GbPrx53(Ginbil_2038668_SGTW)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (306)
PWM (Da):   %s   36445.28 (33558.9)  
PI (pH):   %s   5.74 (5.73) Peptide Signal:   %s   cut: 26 range:26-331
Sequence
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Send to Peroxiscan
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MQCLRDCFLC EFVCVLFILR AIVNGDGVVA DDGDGLRLNF YENSCPNAER IAKQTLQQNV GRDPTAAAAL LRVSFHDCQV DGCDASILLQ SSSEMTAETI SDRNFGLRRL DILDNIKAAL  EQACPLTVSC ADIIQMAARD AVSLSGGPFI PILTGRRDGV FANNVRADKQ LPPPTVSVES MLEIFSEKNI STEDGVALLG AHTLGVGHCI NFQNRLSPQQ DPTMSPIFSA ALRMLCRVPA 
PLSNITFAPN DLTNFVFDNQ YFRDIQRNRG LLTIDSEVAS DPRTAAFVFR FSQNQQHFFD RFTAAFLQLS RYRALTGNKG QIRKDCKFVN S 

Retrieve as FASTA  
Remarks Complete sequence from genomic and RNA seq (gba_locus_74064_iso_1_len_1480_ver_2). No EST found.
CDS
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ATGCAGTGCC TCCGAGATTG TTTTTTGTGT GAATTTGTGT GCGTATTGTT CATTCTGCGT GCCATTGTGA ACGGAGATGG AGTTGTAGCC GACGATGGCG ATGGCCTGAG ACTTAATTTC  TATGAGAATA GCTGTCCCAA TGCAGAACGC ATTGCGAAGC AGACATTGCA GCAAAATGTA GGTCGAGATC CGACTGCAGC AGCTGCTCTT CTGCGCGTAT CGTTTCATGA TTGTCAAGTA  GATGGTTGCG ATGCATCGAT TCTTCTGCAA TCTTCTTCAG AAATGACTGC AGAGACTATT TCTGACCGTA ACTTCGGCTT AAGGCGTTTG GATATCCTGG ACAATATCAA AGCAGCTCTG  GAACAAGCCT GCCCTCTTAC AGTTTCCTGC GCTGATATCA TTCAGATGGC AGCTAGAGAT GCGGTATCCC TGTCCGGAGG GCCTTTTATA CCTATTCTGA CTGGACGACG GGACGGAGTT  TTTGCAAACA ATGTCAGAGC AGATAAACAG CTGCCCCCGC CTACTGTTTC AGTTGAAAGT ATGTTGGAGA TATTCAGTGA GAAAAACATC AGTACTGAAG ACGGCGTTGC CCTTTTAGGT  GCGCATACAT TGGGAGTTGG GCATTGCATA AACTTTCAAA ACCGGTTGAG TCCACAGCAG GATCCAACGA TGTCGCCAAT ATTCTCAGCA GCGCTAAGGA TGCTGTGCAG AGTCCCTGCA  CCGCTCTCAA ACATAACATT CGCACCCAAC GATCTGACAA ACTTCGTGTT CGATAACCAA TATTTCAGAG ACATCCAACG CAACCGCGGG CTACTGACCA TCGACTCCGA AGTGGCTTCC  GATCCCCGTA CGGCTGCCTT CGTCTTCAGG TTTTCACAAA ACCAGCAGCA CTTTTTCGAC AGATTTACCG CTGCTTTTCT CCAACTTAGC CGCTATAGGG CTCTGACTGG CAATAAAGGC 
CAAATCCGAA AGGATTGCAA GTTTGTCAAC TCTTGA 

Retrieve as FASTA  
cDNA
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GTTGAAGCAT ATCTTCAGTG TGCTCCAGGA AGACGTTCCA GGCATTGCAG AGGGTATTGA ACGCAATCCT TAGAAAGAAT TTAGAAGCCT ATAGCACCAA TGCAGTGCCT CCGAGATTGT  TTTTTGTGTG AATTTGTGTG CGTATTGTTC ATTCTGCGTG CCATTGTGAA CGGAGATGGA GTTGTAGCCG ACGATGGCGA TGGCCTGAGA CTTAATTTCT ATGAGAATAG CTGTCCCAAT  GCAGAACGCA TTGCGAAGCA GACATTGCAG CAAAATGTAG GTCGAGATCC GACTGCAGCA GCTGCTCTTC TGCGCGTATC GTTTCATGAT TGTCAAGTAG ATGGTTGCGA TGCATCGATT  CTTCTGCAAT CTTCTTCAGA AATGACTGCA GAGACTATTT CTGACCGTAA CTTCGGCTTA AGGCGTTTGG ATATCCTGGA CAATATCAAA GCAGCTCTGG AACAAGCCTG CCCTCTTACA  GTTTCCTGCG CTGATATCAT TCAGATGGCA GCTAGAGATG CGGTATCCCT GTCCGGAGGG CCTTTTATAC CTATTCTGAC TGGACGACGG GACGGAGTTT TTGCAAACAA TGTCAGAGCA  GATAAACAGC TGCCCCCGCC TACTGTTTCA GTTGAAAGTA TGTTGGAGAT ATTCAGTGAG AAAAACATCA GTACTGAAGA CGGCGTTGCC CTTTTAGGTG CGCATACATT GGGAGTTGGG  CATTGCATAA ACTTTCAAAA CCGGTTGAGT CCACAGCAGG ATCCAACGAT GTCGCCAATA TTCTCAGCAG CGCTAAGGAT GCTGTGCAGA GTCCCTGCAC CGCTCTCAAA CATAACATTC  GCACCCAACG ATCTGACAAA CTTCGTGTTC GATAACCAAT ATTTCAGAGA CATCCAACGC AACCGCGGGC TACTGACCAT CGACTCCGAA GTGGCTTCCG ATCCCCGTAC GGCTGCCTTC  GTCTTCAGGT TTTCACAAAA CCAGCAGCAC TTTTTCGACA GATTTACCGC TGCTTTTCTC CAACTTAGCC GCTATAGGGC TCTGACTGGC AATAAAGGCC AAATCCGAAA GGATTGCAAG  TTTGTCAACT CTTGACTGTC TCAGACAGCT TGCATTAATG AACGTGAGTT AGTGCAGTTT GCATGCATAT CGCACCTGTC AATTTCTTCA TTTTTCTCCT ATTTAATTGC GACTGTGTAC  GGGTTAAGGA TTTAGTGCCG TTCTTAATAA CGGGTTGTCG GAGACACAGG TGATTTACGC TATTCAATGG TATTTTCTTA TGTAGCTATT ATTAATTGCA TTAAATGTAT TCAAAATTTG  ACCTTAGAAC AGGTAnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnATT ATACAACGAG AATCAAATTT CGTTGCCCTA TAGTTAACAC 
CAAATTTAGA GTTTTTAATA TGAAAATATT TTGGTTAGGG 

Retrieve as FASTA