Entry information : GbPrx57(Ginbil_Gb_02952)
Entry ID 13149
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-22 (Christophe Dunand)
Peroxidase information: GbPrx57(Ginbil_Gb_02952)
Name GbPrx57(Ginbil_Gb_02952)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx57
start..stop
S start..stop
GbPrx27 510 0 1..324 16..335
AcoPrx83 464 4e-166 17..324 19..323
GbPrx43 459 2e-164 1..324 8..323
RcPrx09 457 1e-163 7..324 4..321
Literature and cross-references GbPrx57(Ginbil_Gb_02952)
Protein sequence: GbPrx57(Ginbil_Gb_02952)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325
PWM (Da):   %s   34935.66  
PI (pH):   %s   7.99
Sequence
Send to BLAST
Send to Peroxiscan
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MAFRVVFVLL LVIALAEGQG TKTKTKVGFY SSTCPKAESM VRSTVESHVK ADVGVAAGVL RMHFHDCFVQ GCDGSVLISG PSAEKNALPN LGLRGFEVIN DAKTKIEAEC PGVVSCADIL  ALAARDAVAL TKGLNWSVPT GRRDGLVSSS SDAANLPAPA DSISVQKQKF ADKGLTAEDL VTLVGAHTLG QSDCQFFRYR LYNFTSTGSA DPTINPAYLA QLQTLCPADG DATNRVALDK 
GSQNVFDDSF FHNVRDGNAI LESDQRLWSD ATTKRYVERY ARAIRPQLTN RFAVAFANSM VKMSNIGVKT GTQGEIRNLC YAFNN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and RNA seq : gba_locus_54206_iso_1_len_512_ver_2 and gba_locus_73330_iso_1_len_542_ver_2. No EST found.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTTTA GAGTTGTATT CGTGTTGTTA CTGGTTATTG CGTTAGCGGA GGGTCAGGGA ACGAAAACGA AAACGAAAGT AGGCTTTTAC TCCTCCACCT GTCCTAAAGC CGAGTCTATG  GTGAGATCCA CAGTAGAATC GCATGTTAAG GCTGACGTAG GTGTTGCTGC GGGAGTGCTA AGGATGCACT TCCATGACTG CTTTGTCCAG GGGTGCGATG GATCCGTCCT CATCAGTGGG  CCATCAGCAG AGAAAAATGC GCTTCCAAAT CTTGGATTGA GAGGATTTGA AGTTATTAAT GACGCCAAGA CCAAAATCGA AGCGGAATGC CCAGGAGTAG TTTCGTGCGC TGATATTCTC  GCCCTTGCAG CCCGGGATGC AGTAGCGCTG ACCAAGGGAC TCAACTGGTC CGTGCCAACG GGGAGGAGAG ACGGATTGGT TTCGTCCTCG TCGGACGCCG CCAATCTGCC CGCACCCGCC  GACTCCATCA GCGTGCAGAA GCAAAAATTT GCTGACAAAG GCCTCACCGC AGAGGATCTC GTCACACTTG TTGGAGCCCA TACCCTGGGA CAGAGTGACT GCCAATTCTT CAGATATCGT  CTCTACAACT TCACATCTAC CGGCAGTGCC GATCCCACAA TCAATCCTGC CTACCTCGCC CAGCTGCAGA CACTCTGTCC TGCCGATGGC GATGCAACCA ACCGAGTCGC TCTGGACAAG  GGCAGCCAAA ACGTGTTCGA TGACAGCTTC TTCCACAACG TCAGAGACGG CAACGCCATC CTTGAATCCG ATCAACGACT CTGGTCAGAT GCCACTACCA AGAGATACGT GGAGAGGTAT  GCCCGCGCCA TCAGGCCACA GCTTACCAAC CGATTCGCCG TTGCCTTCGC AAACTCCATG GTCAAGATGA GCAACATTGG AGTCAAGACC GGTACTCAGG GCGAAATTCG AAACCTCTGC 
TACGCCTTCA ACAATTAA 

Retrieve as FASTA