Entry information : GbPrx58 (gba_locus_67582_iso_1_len_338_ver_2)
Entry ID 13150
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbPrx58 (gba_locus_67582_iso_1_len_338_ver_2)
Name (synonym) GbPrx58 (gba_locus_67582_iso_1_len_338_ver_2)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx58
start..stop
S start..stop
GbPrx52 171 7e-55 1..81 1..81
PtaPrx14 115 2e-33 1..81 1..80
PabPrx80 114 3e-33 1..81 1..80
PabPrx164 113 2e-32 1..81 1..80
Literature and cross-references GbPrx58 (gba_locus_67582_iso_1_len_338_ver_2)
Protein sequence: GbPrx58 (gba_locus_67582_iso_1_len_338_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   81 (57)
PWM (Da):   %s   8821.35 (6205.1) Transmb domain:   %s   i5-27o
PI (pH):   %s   7.21 (6.48) Peptide Signal:   %s   cut: 25 range:25-81
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAFRFACCFV GVIWIVLIGC TTNAQLTSNF YQNTCPNVIS IVNQTIQQAL QSDSRIAASL LRLHFHDCFV NGCDGSVLLN D 

Retrieve as FASTA  
Remarks Partial sequence from RNA seq. Short 5'end. No EST found
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCATTTA GATTTGCTTG TTGCTTCGTA GGAGTTATTT GGATTGTGTT GATAGGATGC ACTACCAACG CTCAGCTAAC TTCTAATTTT TACCAGAATA CATGCCCCAA TGTAATCAGT  ATAGTGAACC AGACTATTCA GCAAGCTCTG CAGAGTGATT CCAGGATAGC GGCGTCACTT CTTCGTCTCC ATTTTCACGA CTGCTTTGTG AACGGATGCG ACGGATCGGT TCTTCTTAAT 
GAC 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TATAAATACC GTATTGAAGC AAACCGTGAC TCACACTCGT TGGACAGTTA TAAAAATTGG GCTGCATTCA GGTCTCACTA AGATAGGAGT CCAAAATGGC ATTTAGATTT GCTTGTTGCT  TCGTAGGAGT TATTTGGATT GTGTTGATAG GATGCACTAC CAACGCTCAG CTAACTTCTA ATTTTTACCA GAATACATGC CCCAATGTAA TCAGTATAGT GAACCAGACT ATTCAGCAAG 
CTCTGCAGAG TGATTCCAGG ATAGCGGCGT CACTTCTTCG TCTCCATTTT CACGACTGCT TTGTGAACGG ATGCGACGGA TCGGTTCTTC TTAATGAC 

Retrieve as FASTA