Entry information : GbPrx59 (gba_locus_72815_iso_1_len_320_ver_2)
Entry ID 13151
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbPrx59 (gba_locus_72815_iso_1_len_320_ver_2)
Name (synonym) GbPrx59 (gba_locus_72815_iso_1_len_320_ver_2)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx59
start..stop
S start..stop
VvPrx57 126 4e-37 12..98 15..99
EgrPrx59 119 1e-34 19..98 16..96
PabPrx84 119 2e-34 9..98 3..96
EguPrx59 119 2e-34 19..98 16..96
Literature and cross-references GbPrx59 (gba_locus_72815_iso_1_len_320_ver_2)
Protein sequence: GbPrx59 (gba_locus_72815_iso_1_len_320_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   98 (70)
PWM (Da):   %s   10599.32 (7588.8)  
PI (pH):   %s   7.21 (4.96) Peptide Signal:   %s   cut: 29 range:29-98
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MTKAMLNCRA NLSLISFGIL CICTVSRAEL TANFYEKSCP NVLTIVREVV RRAIIDETRM AASLVRLHFH DCFVNGCDGS LLLDGTDGEK TAGPNVNS 

Retrieve as FASTA  
Remarks Partial sequence from RNa seq. Short 5'end. No EST found.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAAAAG CAATGCTTAA TTGCAGAGCT AATTTGTCTT TGATAAGCTT TGGAATACTT TGCATTTGCA CAGTCTCAAG GGCTGAGTTG ACGGCTAACT TCTATGAGAA GTCCTGTCCA  AACGTCCTCA CTATCGTTCG AGAAGTTGTG AGGCGAGCAA TTATAGACGA AACCCGTATG GCTGCGTCTC TCGTGCGATT ACACTTTCAC GATTGTTTTG TGAACGGTTG TGATGGATCT 
CTGTTGTTGG ACGGCACGGA TGGAGAAAAG ACAGCTGGGC CAAATGTAAA TTCC 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAAATCATAC GTTGTGGGAA ATATATGACA AAAGCAATGC TTAATTGCAG AGCTAATTTG TCTTTGATAA GCTTTGGAAT ACTTTGCATT TGCACAGTCT CAAGGGCTGA GTTGACGGCT  AACTTCTATG AGAAGTCCTG TCCAAACGTC CTCACTATCG TTCGAGAAGT TGTGAGGCGA GCAATTATAG ACGAAACCCG TATGGCTGCG TCTCTCGTGC GATTACACTT TCACGATTGT 
TTTGTGAACG GTTGTGATGG ATCTCTGTTG TTGGACGGCA CGGATGGAGA AAAGACAGCT GGGCCAAATG TAAATTCCGC 

Retrieve as FASTA