Entry information : GbAPx07 (gba_locus_82659_iso_1_len_304_ver_2)
Entry ID 13152
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbAPx07 (gba_locus_82659_iso_1_len_304_ver_2)
Name (synonym) GbAPx07 (gba_locus_82659_iso_1_len_304_ver_2)
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbAPx07
start..stop
S start..stop
AcAPx05 125 1e-37 1..100 106..204
StAPx07 124 1e-36 1..100 105..203
AcoAPx01 126 1e-36 1..100 83..181
MguAPx03 125 1e-36 1..100 119..217
Literature and cross-references GbAPx07 (gba_locus_82659_iso_1_len_304_ver_2)
Protein sequence: GbAPx07 (gba_locus_82659_iso_1_len_304_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   100
PWM (Da):   %s   10871.24  
PI (pH):   %s   4.87
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

WHDAGTFSTE NTPDWPNRGG ANGSVRYMEE QAHAANAGLH HALELLRPIA EKYEDVGNAD LFQLASAVSI EEAGGPDIKP RFGRRDTYKP ECCVPEGRLP 

Retrieve as FASTA  
Remarks Partial sequence from RNa seq. Short 5'end. No EST found.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGGCACGACG CGGGTACCTT CTCTACGGAG AATACACCAG ACTGGCCAAA CAGAGGTGGA GCCAACGGCA GCGTGAGATA CATGGAGGAG CAGGCACATG CAGCCAATGC AGGCCTGCAC  CATGCTCTGG AGCTATTGCG GCCAATTGCA GAGAAGTATG AGGATGTTGG CAATGCTGAC CTATTCCAGC TGGCGTCTGC AGTCTCCATT GAGGAGGCAG GAGGCCCTGA CATCAAGCCA 
CGCTTTGGAC GTCGGGATAC CTACAAGCCA GAGTGCTGCG TGCCAGAGGG TCGCCTGCCA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CATGGCACGA CGCGGGTACC TTCTCTACGG AGAATACACC AGACTGGCCA AACAGAGGTG GAGCCAACGG CAGCGTGAGA TACATGGAGG AGCAGGCACA TGCAGCCAAT GCAGGCCTGC  ACCATGCTCT GGAGCTATTG CGGCCAATTG CAGAGAAGTA TGAGGATGTT GGCAATGCTG ACCTATTCCA GCTGGCGTCT GCAGTCTCCA TTGAGGAGGC AGGAGGCCCT GACATCAAGC 
CACGCTTTGG ACGTCGGGAT ACCTACAAGC CAGAGTGCTG CGTGCCAGAG GGTCGCCTGC CAGA 

Retrieve as FASTA