Entry information : GbAPx08 (gba_locus_41470_iso_1_len_298_ver_2)
Entry ID 13153
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2015-11-10 (Achraf Jemmat)
Peroxidase information: GbAPx08 (gba_locus_41470_iso_1_len_298_ver_2)
Name (synonym) GbAPx08 (gba_locus_41470_iso_1_len_298_ver_2)
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbAPx08
start..stop
S start..stop
RobtAPx04 145 1e-44 3..86 138..221
MeAPx07 140 5e-44 2..86 109..193
NaeAPx04 140 1e-42 3..86 155..238
EcamAPx08 140 1e-42 3..86 147..230
Literature and cross-references GbAPx08 (gba_locus_41470_iso_1_len_298_ver_2)
Protein sequence: GbAPx08 (gba_locus_41470_iso_1_len_298_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   86
PWM (Da):   %s   9648.86  
PI (pH):   %s   9.58
Sequence
Send to BLAST
Send to Peroxiscan
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KRPGDHLRKV FYRMGFNDQD IVALSGAHTL GRARPERSGN GKEETKYTKA GTPQPGGSSW TVQWLKFDNS YFQDITEQKD PELLVM 

Retrieve as FASTA  
Remarks Partial sequence from RNA seq. Short Fragment.
CDS
Send to BLAST
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AAGCGGCCTG GCGACCACTT GCGCAAGGTC TTCTACCGCA TGGGCTTCAA CGACCAGGAC ATTGTTGCCC TCTCAGGTGC ACACACGCTG GGCCGGGCAA GGCCTGAAAG GTCTGGCAAT  GGCAAGGAAG AGACCAAGTA CACCAAGGCA GGCACTCCAC AACCCGGCGG ATCATCTTGG ACAGTCCAAT GGCTGAAGTT TGATAACTCC TACTTCCAGG ATATCACGGA GCAGAAGGAC 
CCTGAGCTTT TGGTCATG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAGCGGCCTG GCGACCACTT GCGCAAGGTC TTCTACCGCA TGGGCTTCAA CGACCAGGAC ATTGTTGCCC TCTCAGGTGC ACACACGCTG GGCCGGGCAA GGCCTGAAAG GTCTGGCAAT  GGCAAGGAAG AGACCAAGTA CACCAAGGCA GGCACTCCAC AACCCGGCGG ATCATCTTGG ACAGTCCAAT GGCTGAAGTT TGATAACTCC TACTTCCAGG ATATCACGGA GCAGAAGGAC 
CCTGAGCTTT TGGTCATGGA 

Retrieve as FASTA