Entry information : CfioAPx-CcP03_PJ7
Entry ID 13167
Creation 2015-04-21 (Christophe Dunand)
Last sequence changes 2015-04-21 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-04-21 (Christophe Dunand)
Peroxidase information: CfioAPx-CcP03_PJ7
Name CfioAPx-CcP03_PJ7
Class Hybrid Ascorbate-Cytochrome C peroxidase     [Orthogroup: APx-CcP002]*
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Glomerellaceae Glomerella
Organism Colletotrichum fioriniae (Glomerella acutata)    [TaxId: 710243 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CfioAPx-CcP03_PJ7
start..stop
S start..stop
CfioAPx-CcP03_MH18 1031 0 1..509 1..509
ChigAPx-CcP03 726 0 77..509 1..436
CorbiAPx-CcP1 543 0 24..503 44..530
CgloAPx-CcP03_ST23 537 0 24..503 44..530
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..1530 1530  
join(1..1530)


exon

Literature and cross-references CfioAPx-CcP03_PJ7
Literature Baroncelli,R., Sreenivasaprasad,S., Sukno,S.A., Thon,M.R. and Holub,E. Draft Genome Sequence of Colletotrichum acutatum Sensu Lato (Colletotrichum fioriniae). Genome Announc 2 (2) (2014)
DNA ref. GenBank:   NW_006889276.1 (1..1527)
Cluster/Prediction ref. Genebank:   19043477
Protein sequence: CfioAPx-CcP03_PJ7
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   509
PWM (Da):   %s   53999.78  
PI (pH):   %s   5.29
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPPRRSASLC QPPSPNFPSH KQNLPGVTPC SFGGNIAGRQ FAAEWIRTAF HDVATTDAAA GTGGLDGSIW FEVGRAENGG AAFNNTFNFF SNLYSIRASA ADLLAMSVVV ANAGCGGARM  PFRAGRVDAA VAGPAGVPEP QTPLNTTLAT FAKAGFSQTE MISLVACGHT LGGVHSRNNP HITGLDPSPD TVTKFDSTFD DFDNRIATEY VRGNTSNPLV VGRNETLNSD KHIFSSDGNK  TIRDLGCTKN GFRTACADVF TRMIDTVPAT VQLTEPVEPV DIKPYVTLAL SSNGSLAFSG WVRVRTTEGT GRDTGDLAVH LSFADRKGEG SVVVPATLDE GGVTYGLWGE TFAWYQFETA  ISAASGISSF LVHLTTPSSN PTSVYKNDGS GFPLDDALLY QASSSCVSRT SVNNERTFTV TAAVLKERAA DVVTMDVVRL VRRSEAIHRR LDVQSVELAA TGEEDSGYAL FQAQVQLATS 
GWSTSFDLIL GGEKEVRVDF LKTQACPRV 

Retrieve as FASTA  
Remarks Partial sequence from genomic (no intron). Only start codon is missing (BAC end)
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCCCCA GGAGGTCCGC ATCTCTTTGC CAGCCCCCCT CCCCAAACTT TCCATCTCAC AAACAAAACC TTCCAGGCGT AACTCCTTGC TCCTTTGGCG GGAACATCGC CGGCCGCCAG  TTCGCCGCCG AGTGGATCCG CACCGCCTTC CACGACGTAG CCACCACCGA CGCCGCGGCG GGGACAGGCG GTCTAGACGG CTCCATCTGG TTCGAGGTCG GCCGCGCCGA GAACGGCGGC  GCTGCCTTCA ACAACACTTT CAACTTCTTC AGCAACCTCT ACTCGATCCG CGCCTCCGCT GCGGACCTGC TCGCCATGAG CGTCGTCGTC GCCAACGCAG GCTGCGGCGG CGCGAGGATG  CCCTTCCGCG CAGGGCGTGT CGACGCTGCG GTTGCAGGCC CCGCGGGCGT GCCAGAGCCG CAGACGCCGC TCAACACGAC GCTGGCGACG TTTGCGAAAG CCGGCTTCAG CCAGACCGAG  ATGATTTCGC TCGTGGCGTG CGGGCATACC CTCGGCGGCG TGCATAGCCG GAATAACCCG CACATCACAG GCCTCGACCC GAGCCCGGAC ACGGTGACCA AGTTTGATAG TACGTTTGAC  GACTTTGATA ACCGGATCGC GACCGAGTAC GTGCGGGGCA ACACGTCGAA CCCGTTGGTC GTCGGGCGGA ACGAGACGCT CAACTCGGAC AAGCATATCT TCTCGTCGGA CGGGAACAAA  ACGATCAGGG ACCTGGGGTG TACCAAGAAC GGCTTCAGGA CGGCGTGCGC CGATGTCTTT ACGCGCATGA TTGATACCGT GCCCGCAACG GTGCAGTTGA CAGAGCCCGT CGAGCCCGTC  GATATCAAGC CCTACGTCAC GCTGGCCCTG AGCAGCAACG GGAGCCTGGC GTTCAGCGGC TGGGTGCGCG TGAGGACGAC GGAAGGGACG GGGCGAGACA CGGGCGATTT GGCCGTCCAC  CTGAGCTTTG CAGACCGAAA GGGCGAGGGT TCCGTTGTCG TCCCCGCGAC GCTCGACGAA GGGGGCGTCA CGTACGGCCT CTGGGGCGAG ACGTTCGCCT GGTACCAATT CGAGACGGCC  ATCAGCGCAG CGAGCGGTAT AAGCAGCTTT CTTGTCCACC TGACGACGCC CTCCAGCAAC CCCACATCCG TGTACAAGAA CGACGGTAGC GGGTTCCCGC TAGACGACGC GCTGCTCTAC  CAAGCATCCT CCTCTTGCGT CAGCCGGACG AGCGTGAACA ACGAGCGCAC CTTCACCGTC ACGGCAGCGG TGCTGAAGGA GCGCGCGGCG GATGTGGTGA CGATGGATGT TGTGCGTCTT  GTGCGACGTT CCGAGGCGAT CCACAGGAGG CTCGACGTCC AGAGCGTCGA ACTCGCGGCG ACGGGCGAGG AGGATAGCGG GTATGCACTT TTCCAGGCGC AGGTGCAGCT TGCGACGAGC 
GGCTGGAGCA CCAGCTTCGA TCTTATTTTG GGAGGGGAGA AGGAGGTTCG GGTCGACTTT TTGAAGACAC AAGCTTGTCC GCGTGTATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCCCCA GGAGGTCCGC ATCTCTTTGC CAGCCCCCCT CCCCAAACTT TCCATCTCAC AAACAAAACC TTCCAGGCGT AACTCCTTGC TCCTTTGGCG GGAACATCGC CGGCCGCCAG  TTCGCCGCCG AGTGGATCCG CACCGCCTTC CACGACGTAG CCACCACCGA CGCCGCGGCG GGGACAGGCG GTCTAGACGG CTCCATCTGG TTCGAGGTCG GCCGCGCCGA GAACGGCGGC  GCTGCCTTCA ACAACACTTT CAACTTCTTC AGCAACCTCT ACTCGATCCG CGCCTCCGCT GCGGACCTGC TCGCCATGAG CGTCGTCGTC GCCAACGCAG GCTGCGGCGG CGCGAGGATG  CCCTTCCGCG CAGGGCGTGT CGACGCTGCG GTTGCAGGCC CCGCGGGCGT GCCAGAGCCG CAGACGCCGC TCAACACGAC GCTGGCGACG TTTGCGAAAG CCGGCTTCAG CCAGACCGAG  ATGATTTCGC TCGTGGCGTG CGGGCATACC CTCGGCGGCG TGCATAGCCG GAATAACCCG CACATCACAG GCCTCGACCC GAGCCCGGAC ACGGTGACCA AGTTTGATAG TACGTTTGAC  GACTTTGATA ACCGGATCGC GACCGAGTAC GTGCGGGGCA ACACGTCGAA CCCGTTGGTC GTCGGGCGGA ACGAGACGCT CAACTCGGAC AAGCATATCT TCTCGTCGGA CGGGAACAAA  ACGATCAGGG ACCTGGGGTG TACCAAGAAC GGCTTCAGGA CGGCGTGCGC CGATGTCTTT ACGCGCATGA TTGATACCGT GCCCGCAACG GTGCAGTTGA CAGAGCCCGT CGAGCCCGTC  GATATCAAGC CCTACGTCAC GCTGGCCCTG AGCAGCAACG GGAGCCTGGC GTTCAGCGGC TGGGTGCGCG TGAGGACGAC GGAAGGGACG GGGCGAGACA CGGGCGATTT GGCCGTCCAC  CTGAGCTTTG CAGACCGAAA GGGCGAGGGT TCCGTTGTCG TCCCCGCGAC GCTCGACGAA GGGGGCGTCA CGTACGGCCT CTGGGGCGAG ACGTTCGCCT GGTACCAATT CGAGACGGCC  ATCAGCGCAG CGAGCGGTAT AAGCAGCTTT CTTGTCCACC TGACGACGCC CTCCAGCAAC CCCACATCCG TGTACAAGAA CGACGGTAGC GGGTTCCCGC TAGACGACGC GCTGCTCTAC  CAAGCATCCT CCTCTTGCGT CAGCCGGACG AGCGTGAACA ACGAGCGCAC CTTCACCGTC ACGGCAGCGG TGCTGAAGGA GCGCGCGGCG GATGTGGTGA CGATGGATGT TGTGCGTCTT  GTGCGACGTT CCGAGGCGAT CCACAGGAGG CTCGACGTCC AGAGCGTCGA ACTCGCGGCG ACGGGCGAGG AGGATAGCGG GTATGCACTT TTCCAGGCGC AGGTGCAGCT TGCGACGAGC 
GGCTGGAGCA CCAGCTTCGA TCTTATTTTG GGAGGGGAGA AGGAGGTTCG GGTCGACTTT TTGAAGACAC AAGCTTGTCC GCGTGTATGA 

Retrieve as FASTA