Entry information : SymCP2_clade_D (SymKatG2)
Entry ID 13184
Creation 2015-04-27 (Marcel Zamocky)
Last sequence changes 2015-04-27 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-05-06 (Christophe Dunand)
Peroxidase information: SymCP2_clade_D (SymKatG2)
Name (synonym) SymCP2_clade_D (SymKatG2)
Class Catalase peroxidase    [Orthogroup: CP002]
Taxonomy Eukaryota Dinophyceae Symbiodiniaceae Symbiodinium
Organism Symbiodinium sp.    [TaxId: 2950 ]
Cellular localisation Secreted
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SymCP2_clade_D
start..stop
S start..stop
KbCP01 441 2e-153 4..423 9..423
VcaCP01 427 1e-144 42..388 57..402
VcaCP01 79 4e-16 48..166 435..556
VcaCP01 50 0.0000008 297..386 609..694
CreCP01 406 1e-135 52..389 59..394
CreCP01 84 2e-17 73..386 456..715
BnaCP 402 3e-134 40..409 60..476
BnaCP 117 9e-29 22..386 468..751
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14..1285 1272  
complement(join(14..1285))


exon

Literature and cross-references SymCP2_clade_D (SymKatG2)
Literature Krueger T., Fisher P.L., Becker S., Pontasch S., Dove S., Hoegh-Guldberg O., Leggat W., Davy S.K. (2015) Transcriptomic characterization of the enzymatic antioxidants FeSOD, MnSOD, APx and KatG in the dinoflagellate genus Symbiodinium. BMC Evol. Biol. 15:48
mRNA ref. GenBank:   GAFP01010883
Protein sequence: SymCP2_clade_D (SymKatG2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   423 (407)
PWM (Da):   %s   46589.79 (44908.8)  
PI (pH):   %s   5.9 (5.47) Peptide Signal:   %s   cut: 17 range:17-423
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARALLLALM LRGSLASPCP GIAYSVPPQN YYVVPELPVY DKSLKELDLK AVVADMQKLF LDSQECWPAD WGHYGPFFVR LAWHCSGTWR ITDGRGGCAG GRQRFEPERS WADNTNLDKA  RALLWPIKSK FGAGLSWGDL FTLAGTAAIK MMGGPITEYC AGRIDSPDGT ESLDLGPSEE QRKYAPCAIN GTCQRPLGST TVGLIYLNPE GPVTKQPDGH YDVDPDPAKS AKDIRDAFGR  MGMNDSQTVA LIGGGHTFGK SHGACPEGPG PAPNQDVHNP WPGKCGTGKG NDTFTSGMEG PWTTKPTEWD NEFFVDLLNR SWELIKGPGG HWQWQVKNAV EAEKKLMRLT SDMALIHDDI 
YQALVQEFAL NMPAYERAFD EAWFKLTTNG GRWSQEKKCI KGEDFPVPQR STPRMRYDDP ITV 

Retrieve as FASTA  
Remarks complete sequence from mRNA.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCAGACTGTG ATCGGATCAT CATACCGCAT GCGTGGCGTG GAGCGCTGAG GCACCGGGAA GTCCTCGCCT TTGATGCATT TCTTCTCCTG CGACCAACGC CCGCCGTTGG TCGTGAGCTT  GAACCATGCC TCATCGAAGG CGCGTTCGTA GGCCGGCATG TTCAGTGCAA ATTCCTGCAC GAGAGCTTGG TAGATGTCAT CATGGATCAA GGCCATGTCG CTGGTGAGCC TCATGAGCTT  CTTCTCGGCC TCAACGGCAT TCTTCACCTG CCACTGCCAA TGTCCACCTG GCCCTTTGAT CAACTCCCAG CTGCGGTTTA GGAGGTCCAC AAAGAACTCA TTGTCCCACT CAGTTGGCTT  CGTGGTCCAC GGGCCCTCCA TGCCACTGGT GAAGGTGTCG TTCCCCTTGC CAGTACCACA CTTCCCAGGC CAAGGATTGT GCACATCCTG ATTGGGTGCG GGCCCGGGGC CCTCGGGGCA  GGCGCCGTGG CTTTTGCCGA AGGTGTGGCC TCCACCAATG AGTGCCACAG TTTGGGAGTC ATTCATTCCC ATGCGCCCAA AGGCGTCGCG AATGTCTTTG GCGCTCTTGG CGGGGTCGGG  GTCCACATCG TAGTGTCCAT CCGGCTGCTT GGTGACAGGG CCTTCAGGGT TCAAGTAGAT CAGGCCGACC GTGGTGCTGC CCAATGGTCG CTGGCAGGTG CCATTGATGG CGCAGGGTGC  ATACTTCCTC TGCTCCTCGC TGGGGCCCAA ATCCAAGCTC TCGGTACCAT CCGGTGAATC GATGCGCCCC GCGCAGTACT CAGTGATGGG GCCGCCCATC ATCTTGATGG CGGCGGTGCC  GGCCAAGGTG AAGAGGTCAC CCCAACTGAG CCCCGCCCCA AACTTGGACT TGATGGGCCA CAGCAAGGCG CGCGCCTTGT CCAGGTTGGT ATTGTCGGCC CAGGACCTCT CCGGCTCAAA  GCGCTGCCGG CCACCGGCGC AGCCACCGCG CCCATCGGTG ATACGCCACG TGCCCGAGCA ATGCCACGCG AGCCGGACGA AGAAGGGGCC GTAATGGCCC CAGTCGGCTG GCCAACACTC  CTGGGAGTCC AGAAAGAGCT TCTGCATGTC GGCCACAACC GCCTTCAAAT CCAACTCTTT CAACGACTTG TCGTAGACCG GGAGCTCCGG GACCACGTAG TAGTTCTGGG GGGGCACGCT 
GTAGGCGATG CCTGGACAGG GAGAAGCCAG GCTGCCGCGC AGCATCAAGG CCAGTAGCAG GGCACGTGCC AT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCAGACTGTG ATCGGATCAT CATACCGCAT GCGTGGCGTG GAGCGCTGAG GCACCGGGAA GTCCTCGCCT TTGATGCATT TCTTCTCCTG CGACCAACGC CCGCCGTTGG TCGTGAGCTT  GAACCATGCC TCATCGAAGG CGCGTTCGTA GGCCGGCATG TTCAGTGCAA ATTCCTGCAC GAGAGCTTGG TAGATGTCAT CATGGATCAA GGCCATGTCG CTGGTGAGCC TCATGAGCTT  CTTCTCGGCC TCAACGGCAT TCTTCACCTG CCACTGCCAA TGTCCACCTG GCCCTTTGAT CAACTCCCAG CTGCGGTTTA GGAGGTCCAC AAAGAACTCA TTGTCCCACT CAGTTGGCTT  CGTGGTCCAC GGGCCCTCCA TGCCACTGGT GAAGGTGTCG TTCCCCTTGC CAGTACCACA CTTCCCAGGC CAAGGATTGT GCACATCCTG ATTGGGTGCG GGCCCGGGGC CCTCGGGGCA  GGCGCCGTGG CTTTTGCCGA AGGTGTGGCC TCCACCAATG AGTGCCACAG TTTGGGAGTC ATTCATTCCC ATGCGCCCAA AGGCGTCGCG AATGTCTTTG GCGCTCTTGG CGGGGTCGGG  GTCCACATCG TAGTGTCCAT CCGGCTGCTT GGTGACAGGG CCTTCAGGGT TCAAGTAGAT CAGGCCGACC GTGGTGCTGC CCAATGGTCG CTGGCAGGTG CCATTGATGG CGCAGGGTGC  ATACTTCCTC TGCTCCTCGC TGGGGCCCAA ATCCAAGCTC TCGGTACCAT CCGGTGAATC GATGCGCCCC GCGCAGTACT CAGTGATGGG GCCGCCCATC ATCTTGATGG CGGCGGTGCC  GGCCAAGGTG AAGAGGTCAC CCCAACTGAG CCCCGCCCCA AACTTGGACT TGATGGGCCA CAGCAAGGCG CGCGCCTTGT CCAGGTTGGT ATTGTCGGCC CAGGACCTCT CCGGCTCAAA  GCGCTGCCGG CCACCGGCGC AGCCACCGCG CCCATCGGTG ATACGCCACG TGCCCGAGCA ATGCCACGCG AGCCGGACGA AGAAGGGGCC GTAATGGCCC CAGTCGGCTG GCCAACACTC  CTGGGAGTCC AGAAAGAGCT TCTGCATGTC GGCCACAACC GCCTTCAAAT CCAACTCTTT CAACGACTTG TCGTAGACCG GGAGCTCCGG GACCACGTAG TAGTTCTGGG GGGGCACGCT 
GTAGGCGATG CCTGGACAGG GAGAAGCCAG GCTGCCGCGC AGCATCAAGG CCAGTAGCAG GGCACGTGCC AT 

Retrieve as FASTA