Entry information : SpolPrx09 (Spipo3G0072300)
Entry ID 13208
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-06-17 (Christophe Dunand)
Peroxidase information: SpolPrx09 (Spipo3G0072300)
Name (synonym) SpolPrx09 (Spipo3G0072300)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx09
start..stop
S start..stop
SpolPrx39 491 6e-179 1..258 5..262
BdiPrx67 293 1e-99 1..250 76..332
SiPrx47 291 1e-98 1..256 70..341
SiPrx46 289 9e-98 1..252 72..339
Literature and cross-references SpolPrx09 (Spipo3G0072300)
Protein sequence: SpolPrx09 (Spipo3G0072300)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   258
PWM (Da):   %s   27331  
PI (pH):   %s   4.8
Sequence
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Send to Peroxiscan
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GCDASVLLDS TPGNPSEKEA IPNLTLRGFE VIDAAKEAIE AECPGVVSCA DILTFAARDS AALAGNISYQ VPAGRRDGVV SNISEADLPP PFANATELIR RFAEKNLTAD ELVTLSGAHS  IGVAHCGTFL GRIFQNGSSQ IDPTLSLSYA ELLQTRCTPT PLSTTTVRQD LITADVLDNK YYVGLQNNLG LFTSDHALTT VAALKAAVDV NARYPAVWAE KFKRATVKMG AIEVLTGDQG 
EIRKQCRVIN SAPSLAVE* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. First exon is missing due to N in the sequence.
DNA
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CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTAGAG ACTTAGCTTT CAGAACTTGA CCGGTGCGTA AAAAATTGCA GGGCTGCGAT GCCTCCGTGC  TCCTCGACTC CACACCGGGG AACCCATCGG AGAAGGAGGC GATCCCCAAT CTGACCCTCC GCGGCTTCGA GGTTATCGAC GCTGCTAAGG AGGCCATCGA GGCCGAGTGC CCCGGCGTGG  TCTCCTGCGC CGATATCCTC ACCTTCGCCG CCCGCGACAG CGCCGCCCTC GCCGGCAACA TCTCCTACCA GGTCCCCGCT GGGCGCCGCG ATGGCGTCGT CTCCAACATC TCGGAGGCGG  ATCTTCCCCC GCCGTTCGCC AACGCCACTG AACTCATCCG ACGCTTCGCC GAGAAGAACC TGACGGCGGA CGAGCTGGTC ACCCTCTCCG GCGCCCACTC CATCGGCGTT GCCCACTGCG  GGACCTTCCT CGGCCGGATC TTCCAGAACG GCAGTAGCCA GATCGACCCA ACTCTGAGCC TCTCCTACGC CGAGCTGTTG CAAACCAGGT GCACGCCCAC GCCCTTGAGT ACGACGACGG  TGAGACAGGA TCTGATCACC GCCGACGTTC TGGACAACAA GTACTACGTG GGGCTTCAGA ACAATCTGGG GTTGTTCACC TCCGACCACG CTCTGACGAC GGTGGCTGCC CTTAAGGCGG  CGGTGGACGT CAACGCGAGG TACCCCGCTG TGTGGGCAGA GAAGTTCAAG CGCGCTACGG TGAAGATGGG GGCCATCGAG GTGCTTACGG GCGACCAGGG AGAGATCAGG AAGCAGTGCA 
GGGTCATTAA CAGCGCCCCC TCCTTGGCTG TGGAATGA 

Retrieve as FASTA  
CDS
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GGCTGCGATG CCTCCGTGCT CCTCGACTCC ACACCGGGGA ACCCATCGGA GAAGGAGGCG ATCCCCAATC TGACCCTCCG CGGCTTCGAG GTTATCGACG CTGCTAAGGA GGCCATCGAG  GCCGAGTGCC CCGGCGTGGT CTCCTGCGCC GATATCCTCA CCTTCGCCGC CCGCGACAGC GCCGCCCTCG CCGGCAACAT CTCCTACCAG GTCCCCGCTG GGCGCCGCGA TGGCGTCGTC  TCCAACATCT CGGAGGCGGA TCTTCCCCCG CCGTTCGCCA ACGCCACTGA ACTCATCCGA CGCTTCGCCG AGAAGAACCT GACGGCGGAC GAGCTGGTCA CCCTCTCCGG CGCCCACTCC  ATCGGCGTTG CCCACTGCGG GACCTTCCTC GGCCGGATCT TCCAGAACGG CAGTAGCCAG ATCGACCCAA CTCTGAGCCT CTCCTACGCC GAGCTGTTGC AAACCAGGTG CACGCCCACG  CCCTTGAGTA CGACGACGGT GAGACAGGAT CTGATCACCG CCGACGTTCT GGACAACAAG TACTACGTGG GGCTTCAGAA CAATCTGGGG TTGTTCACCT CCGACCACGC TCTGACGACG  GTGGCTGCCC TTAAGGCGGC GGTGGACGTC AACGCGAGGT ACCCCGCTGT GTGGGCAGAG AAGTTCAAGC GCGCTACGGT GAAGATGGGG GCCATCGAGG TGCTTACGGG CGACCAGGGA 
GAGATCAGGA AGCAGTGCAG GGTCATTAAC AGCGCCCCCT CCTTGGCTGT GGAATGA 

Retrieve as FASTA