Entry information : GbPrx05 (gba_locus_73158_iso_1_len_1280_ver_2)
Entry ID 1321
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2015-02-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-02-13 (Christophe Dunand)
Peroxidase information: GbPrx05 (gba_locus_73158_iso_1_len_1280_ver_2)
Name (synonym) GbPrx05 (gba_locus_73158_iso_1_len_1280_ver_2)
Class Class III peroxidase    [Orthogroup: Prx135]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue types Leaves
Ovule
Sporophyll
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx05
start..stop
S start..stop
PabPrx86 551 0 15..336 8..326
CclPrx34 459 7e-164 11..337 2..330
CsPrx42 456 1e-162 35..337 27..330
PtPrx31 454 4e-162 17..336 11..330
Literature and cross-references GbPrx05 (gba_locus_73158_iso_1_len_1280_ver_2)
Literature Brenner,E.D., Twigg,R.W., Runko,S.J., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Ginkgo microsporophyll
EST ref. GenBank:   DR063640.1 [3' end]   EX937606.1 [Fragment]
Protein sequence: GbPrx05 (gba_locus_73158_iso_1_len_1280_ver_2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337
PWM (Da):   %s   36841.34 Transmb domain:   %s   o10-32i
PI (pH):   %s   7.63
Sequence
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Send to Peroxiscan
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MAATLNSALF AFAPVNIIVL LMLGFFCEGL VGQYLSKDYY KNTCPNVENI VRNVVAQKLK EAPTTAPGAL RLFFHDCFVE GCDASVLIAS SDGNTAEKDA DINLSLPGDG FDVFFRVKRA  LESQCPNVVS CADIMAMATR DLVSMIGGPR WEVLKGRRDG LISEASRVAG NLPTVNMTVD QLTSLFRSKG LSQADMVTLS GGHTVGFAHC NEFMYRIYNF NKTYDIDPTM NPKYAMRLRA 
SCPRDGFDPT VVAFNDVSTP TAFDNAYYQN AQRGLALLAT DQLLFADIRT RGYVNSFAKS KQTFFNSFVA SMIRLGNVGV KTGNQGEIRR DCGVFNG 

Retrieve as FASTA  
Remarks Complete sequence from 4 ESTs (DR063640, DR073861 and DR074380) (also accessions ip68c07.g1.b, qs66d06.b1.b, ik93b06.b1.b found in the Vicogenta database). Assembly by the PeroxiBase team.
CDS
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ATGGCTGCAA CATTGAACTC CGCATTATTT GCTTTTGCCC CTGTGAATAT CATTGTATTG CTTATGTTGG GCTTCTTCTG TGAAGGTCTT GTGGGGCAGT ACCTGAGCAA AGATTATTAC  AAAAATACAT GTCCTAATGT TGAGAATATT GTGAGAAATG TTGTTGCACA AAAGTTGAAG GAAGCTCCTA CTACTGCCCC CGGTGCTCTC CGCCTTTTCT TCCATGATTG TTTTGTCGAG  GGCTGTGATG CATCAGTGCT TATTGCTTCA AGTGATGGTA ATACAGCAGA AAAGGATGCA GACATTAACC TGTCGTTGCC GGGAGATGGG TTCGATGTTT TCTTCAGAGT GAAGAGAGCT  TTGGAATCAC AGTGCCCTAA TGTTGTGTCG TGTGCTGATA TCATGGCAAT GGCTACCAGA GATCTCGTCT CCATGATTGG AGGACCAAGG TGGGAAGTCC TGAAGGGGCG AAGAGATGGG  CTTATCTCAG AGGCATCAAG AGTGGCAGGG AACTTGCCCA CTGTAAATAT GACAGTCGAT CAACTCACTT CACTGTTTCG GTCCAAAGGT CTAAGCCAAG CCGACATGGT CACTCTGTCT  GGTGGGCACA CAGTTGGGTT CGCACACTGC AACGAATTCA TGTACAGAAT ATATAACTTT AACAAGACAT ACGACATCGA TCCAACCATG AACCCAAAAT ATGCAATGAG GCTCCGGGCG  TCATGCCCAA GAGATGGTTT TGACCCAACT GTCGTTGCCT TCAACGACGT TTCCACTCCA ACTGCCTTCG ACAATGCGTA TTATCAGAAT GCCCAGAGAG GGCTGGCGCT TCTGGCCACC  GACCAGCTTC TCTTTGCCGA TATCCGCACT CGTGGGTATG TCAATTCCTT TGCAAAGTCC AAGCAAACCT TCTTTAATTC CTTTGTAGCT TCCATGATAA GGTTGGGGAA TGTTGGAGTT 
AAGACTGGCA ATCAGGGAGA AATCCGGAGA GACTGTGGAG TCTTCAACGG CTAA 

Retrieve as FASTA  
cDNA
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CTTGTATTCT TTCAACTTCA TGTTAATAAA AGAGCACCAT TACCATAGCC TGAAACACAA CAGCTAAGGG GAGTTGTAAT GCTGCATGCA TTGGAGTGGA TGTGAGTTAT CCATGGCTGC  AACATTGAAC TCCGCATTAT TTGCTTTTGC CCCTGTGAAT ATCATTGTAT TGCTTATGTT GGGCTTCTTC TGTGAAGGTC TTGTGGGGCA GTACCTGAGC AAAGATTATT ACAAAAATAC  ATGTCCTAAT GTTGAGAATA TTGTGAGAAA TGTTGTTGCA CAAAAGTTGA AGGAAGCTCC TACTACTGCC CCCGGTGCTC TCCGCCTTTT CTTCCATGAT TGTTTTGTCG AGGGCTGTGA  TGCATCAGTG CTTATTGCTT CAAGTGATGG TAATACAGCA GAAAAGGATG CAGACATTAA CCTGTCGTTG CCGGGAGATG GGTTCGATGT TTTCTTCAGA GTGAAGAGAG CTTTGGAATC  ACAGTGCCCT AATGTTGTGT CGTGTGCTGA TATCATGGCA ATGGCTACCA GAGATCTCGT CTCCATGATT GGAGGACCAA GGTGGGAAGT CCTGAAGGGG CGAAGAGATG GGCTTATCTC  AGAGGCATCA AGAGTGGCAG GGAACTTGCC CACTGTAAAT ATGACAGTCG ATCAACTCAC TTCACTGTTT CGGTCCAAAG GTCTAAGCCA AGCCGACATG GTCACTCTGT CTGGTGGGCA  CACAGTTGGG TTCGCACACT GCAACGAATT CATGTACAGA ATATATAACT TTAACAAGAC ATACGACATC GATCCAACCA TGAACCCAAA ATATGCAATG AGGCTCCGGG CGTCATGCCC  AAGAGATGGT TTTGACCCAA CTGTCGTTGC CTTCAACGAC GTTTCCACTC CAACTGCCTT CGACAATGCG TATTATCAGA ATGCCCAGAG AGGGCTGGCG CTTCTGGCCA CCGACCAGCT  TCTCTTTGCC GATATCCGCA CTCGTGGGTA TGTCAATTCC TTTGCAAAGT CCAAGCAAAC CTTCTTTAAT TCCTTTGTAG CTTCCATGAT AAGGTTGGGG AATGTTGGAG TTAAGACTGG  CAATCAGGGA GAAATCCGGA GAGACTGTGG AGTCTTCAAC GGCTAAAATG ATGTTTTTAC TTAATAATGC CAAAGATGGC GCCCCTCCCT TAGGATATTC GTTTATGCTG CAATATTTAA 
CATTTTAAAG TCTAATTTTA AGTTATCTGG TGTGATTTGC CCATTGCCCA AGCTATATGC TCAACTATGC AATTTTAAAA 

Retrieve as FASTA