Entry information : SpolPrx10 (Spipo3G0001200)
Entry ID 13210
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-06-17 (Christophe Dunand)
Peroxidase information: SpolPrx10 (Spipo3G0001200)
Name (synonym) SpolPrx10 (Spipo3G0001200)
Class Class III peroxidase     [Orthogroup: Prx012]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx10
start..stop
S start..stop
MtPrx02 273 1e-92 1..223 97..321
MtPrx70 268 7e-91 1..223 97..321
MtPrx[P]115 264 3e-90 1..223 6..230
MtPrx86 264 3e-89 1..223 97..321
Literature and cross-references SpolPrx10 (Spipo3G0001200)
Protein sequence: SpolPrx10 (Spipo3G0001200)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   223
PWM (Da):   %s   24241.95  
PI (pH):   %s   5.31
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
VKGFDVVDLI KEAVDSVCND YVVSCADILA VAARDSVVAL GGRWYQVPLG RRDTRTVSFD DANNTLPSPS LDRAGLEESF RNRGLSNKDL VVLSGAHTLG RAACGNFRDR IYNDSDIDAG 
FASSLRERCP PAGNGGNLAP LDSSPDRFDV AYYSELVHRK GLLHSDQQLF QGDGSESDHL VKHYSKNLGS FWDDFGVSMI RMGNIRPLTG DSGEIRRTCG AVN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Exon 1 and part of exon 2 are missing due to N in the sequence
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTAAGGGCT TCGACGTGGT CGATTTGATC AAGGAAGCTG TTGACTCCGT CTGCAACGAC TACGTGGTGT CTTGCGCGGA CATCTTAGCG GTCGCCGCCC GCGACTCCGT TGTGGCCGTG  AGTCTCGCGC CCACCTCCGT CTCCACACCC ATGCCCGGTC AGACGTCCTT CAGTTCCCGT TCTAACATCT GCTTTCAACC TGCAGTTGGG TGGGAGGTGG TACCAGGTGC CGTTGGGAAG  AAGGGACACG AGAACCGTTA GCTTTGACGA CGCGAACAAC ACCTTACCCT CGCCGTCCTT GGACAGAGCC GGACTCGAGG AGAGTTTCCG AAACCGTGGG TTGTCGAACA AGGACCTGGT  TGTGCTTTCC GGGGCGCACA CCCTCGGACG AGCAGCGTGC GGCAACTTCA GAGACAGGAT CTACAACGAT TCCGACATAG ACGCGGGCTT CGCCAGCTCA CTCCGCGAAC GGTGCCCCCC  CGCCGGGAAC GGCGGCAACC TCGCGCCGCT GGACAGCTCC CCCGATCGTT TCGATGTGGC CTACTACAGC GAGCTGGTGC ACAGGAAGGG GCTCCTCCAC TCCGACCAGC AGCTCTTCCA  GGGAGACGGC AGCGAGAGTG ATCACCTCGT GAAGCACTAC AGCAAGAATC TCGGCAGCTT CTGGGACGAC TTCGGGGTTT CCATGATAAG GATGGGGAAC ATACGCCCCC TCACAGGCGA 
TTCAGGGGAG ATCCGGCGCA CATGCGGGGC CGTTAACTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTAAGGGCT TCGACGTGGT CGATTTGATC AAGGAAGCTG TTGACTCCGT CTGCAACGAC TACGTGGTGT CTTGCGCGGA CATCTTAGCG GTCGCCGCCC GCGACTCCGT TGTGGCCTTG  GGTGGGAGGT GGTACCAGGT GCCGTTGGGA AGAAGGGACA CGAGAACCGT TAGCTTTGAC GACGCGAACA ACACCTTACC CTCGCCGTCC TTGGACAGAG CCGGACTCGA GGAGAGTTTC  CGAAACCGTG GGTTGTCGAA CAAGGACCTG GTTGTGCTTT CCGGGGCGCA CACCCTCGGA CGAGCAGCGT GCGGCAACTT CAGAGACAGG ATCTACAACG ATTCCGACAT AGACGCGGGC  TTCGCCAGCT CACTCCGCGA ACGGTGCCCC CCCGCCGGGA ACGGCGGCAA CCTCGCGCCG CTGGACAGCT CCCCCGATCG TTTCGATGTG GCCTACTACA GCGAGCTGGT GCACAGGAAG  GGGCTCCTCC ACTCCGACCA GCAGCTCTTC CAGGGAGACG GCAGCGAGAG TGATCACCTC GTGAAGCACT ACAGCAAGAA TCTCGGCAGC TTCTGGGACG ACTTCGGGGT TTCCATGATA 
AGGATGGGGA ACATACGCCC CCTCACAGGC GATTCAGGGG AGATCCGGCG CACATGCGGG GCCGTTAACT GA 

Retrieve as FASTA